PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010916038.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

VOZ

Protein Properties

Length: 511aa MW: 56928 Da PI: 5.9696

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010916038.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	442.6	4.7e-136	219	435	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaael 95 pppsafl pkcalwdc+rpaqgsew+qdycssfhatlal+eg+pg+tpvlrp+gidlkdg+lfaal+ak+qgk+vgipecegaatakspwna+el XP_010916038.1 219 PPPSAFLMPKCALWDCPRPAQGSEWYQDYCSSFHATLALHEGPPGMTPVLRPGGIDLKDGPLFAALTAKTQGKNVGIPECEGAATAKSPWNAPEL 313 89******************************************************************************************* PP VOZ 96 fdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklv 190 fdl +l+ge++rewlffdkprrafesgnrkqrslpdy+grgwhesrkqvmkefgglkrsyymdpqp+s++ewhlyeyein++d++alyrlelklv XP_010916038.1 314 FDLLVLNGESLREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMKEFGGLKRSYYMDPQPLSHYEWHLYEYEINNCDSCALYRLELKLV 408 ******************************************************************************************* PP VOZ 191 dekksakgkvskdsladlqkklgrlta 217 d kksakgkv++dsl+dlq+++grl+a XP_010916038.1 409 DPKKSAKGKVMTDSLVDLQQQMGRLNA 435 **********************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence Send to blast
MRKGSKSGVC RSAAHRLLKE RAKNRVDDLQ GLLSDLQAAR KESRTADAAL LEEQVHQMLR 60 EWKAELDEAS TASSLLGNSD ASSDLSSYIR RMLQLNEEED DATSKLAELP PTANPKLEPL 120 AVLGSDVGGG ATAFLDEYFV SQELPEHGFL GAERYKSSLS TGVQQGALNC LEGNTNADYQ 180 QFSLHQELHH SVFTGFDASR QNGGFVVPLI SEFIPALCPP PSAFLMPKCA LWDCPRPAQG 240 SEWYQDYCSS FHATLALHEG PPGMTPVLRP GGIDLKDGPL FAALTAKTQG KNVGIPECEG 300 AATAKSPWNA PELFDLLVLN GESLREWLFF DKPRRAFESG NRKQRSLPDY NGRGWHESRK 360 QVMKEFGGLK RSYYMDPQPL SHYEWHLYEY EINNCDSCAL YRLELKLVDP KKSAKGKVMT 420 DSLVDLQQQM GRLNAENPVD NKQSIKGRVK IKQKDAAENA YLASDMVNQR EHSQKLYSTL 480 DEKAPIDENL GYGPSIPFAY PVNNLNNYYK T

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence Send to blast

MRKGSKSGVC RSAAHRLLKE RAKNRVDDLQ GLLSDLQAAR KESRTADAAL LEEQVHQMLR  60
EWKAELDEAS TASSLLGNSD ASSDLSSYIR RMLQLNEEED DATSKLAELP PTANPKLEPL  120
AVLGSDVGGG ATAFLDEYFV SQELPEHGFL GAERYKSSLS TGVQQGALNC LEGNTNADYQ  180
QFSLHQELHH SVFTGFDASR QNGGFVVPLI SEFIPALCPP PSAFLMPKCA LWDCPRPAQG  240
SEWYQDYCSS FHATLALHEG PPGMTPVLRP GGIDLKDGPL FAALTAKTQG KNVGIPECEG  300
AATAKSPWNA PELFDLLVLN GESLREWLFF DKPRRAFESG NRKQRSLPDY NGRGWHESRK  360
QVMKEFGGLK RSYYMDPQPL SHYEWHLYEY EINNCDSCAL YRLELKLVDP KKSAKGKVMT  420
DSLVDLQQQM GRLNAENPVD NKQSIKGRVK IKQKDAAENA YLASDMVNQR EHSQKLYSTL  480
DEKAPIDENL GYGPSIPFAY PVNNLNNYYK T

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010916038.1	0.0	transcription factor VOZ1 isoform X1
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A2H3XIZ0	0.0	A0A2H3XIZ0_PHODC; transcription factor VOZ1-like isoform X1
STRING	XP_008784453.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2343	38	88

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]