PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010916065.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bHLH
Protein Properties Length: 243aa    MW: 26502.2 Da    PI: 5.6151
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010916065.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.10.000371922291154
                     HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     + R+++++   +Lr ++P        +++  ++L +Av+Y+ksL
  XP_010916065.1 192 K-REKMKKMVKTLRGIIPGG-----DRMDTPAVLDEAVKYLKSL 229
                     4.799*************95.....59***************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.842180229IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.11E-6186234No hitNo description
SMARTSM003534.9E-6187235IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.7E-7189239IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.62E-8190238IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    Send to blast
MQRDRRFFSK KASRSRGYEV GSCALDSAAG ACDADDSAAA PSFGEALTGM KHHEFPVPLN  60
GVEFQPSETC PKNFVIFDQT YNKSRVMFHP SLAHNFGSSS FDVHGTHAHE AGKSMDGDDY  120
NKGEYSSPHI EDAEEIDALL SSEEEDDDVV STGRTPGNWV GSSPDSSCSF SDGIRSSKSK  180
FNSTDASSSE RKREKMKKMV KTLRGIIPGG DRMDTPAVLD EAVKYLKSLK VEVKKLGVQN  240
LDS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010916065.10.0transcription factor bHLH144
RefseqXP_019704507.10.0transcription factor bHLH144
TrEMBLA0A2H3XIS61e-150A0A2H3XIS6_PHODC; transcription factor bHLH144-like
STRINGXP_008784424.11e-151(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP208333
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29950.27e-26bHLH family protein