PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010916182.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

NAC

Protein Properties

Length: 1276aa MW: 141086 Da PI: 4.961

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010916182.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	77.9	2.4e-24	75	214	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.....tks 80 lp+G++F+P+d +l+ +L++kv + + +++ +i+++d +++P++Lp vk++ + yfF+++ k y+t++ k+ + ++ XP_010916182.1 75 LPRGVKFDPSDGDLL-WHLRAKVGKGEadphplISE--FITSLDkddgFGYTHPQKLP-GVKKDGSVSYFFHRSFKIYNTKNPKHWTvhnddSED 165 699**********.8899998777655222..34443333348999**.677788899******98775555423333568 PP NAM 81 gyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +W++ gk+++v++ +g++ g kk++v+y ++ +k+ek++Wvmh+y+l XP_010916182.1 166 IFWQKVGKTRPVIV-DGSHQGGKKIMVLYasMKKGKKPEKSNWVMHQYHL 214 99********.9999******7645677778*******98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	4.84E-27	68	232	IPR003441	NAC domain
PROSITE profile	PS51005	25.142	75	232	IPR003441	NAC domain
Pfam	PF02365	3.3E-11	76	214	IPR003441	NAC domain
PROSITE profile	PS51379	7.248	496	527	IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1276 aa Download sequence Send to blast
MDSAIAIDGS TDKVKIRAGD KCWMDDLDYM PLIKRRRLLL SSTSSPSVPV YSNRPPVDMA 60 VKRVSPGASQ EWPGLPRGVK FDPSDGDLLW HLRAKVGKGE ADPHPLISEF ITSLDKDDGF 120 GYTHPQKLPG VKKDGSVSYF FHRSFKIYNT KNPKHWTVHN DDSEDIFWQK VGKTRPVIVD 180 GSHQGGKKIM VLYASMKKGK KPEKSNWVMH QYHLGTGNGK ERELVVSKIF YENAQGLSPE 240 TVKAIVAEAE TLIVAKLTTG YHETKCNENR VGAGWRELDE YDNCSTEDSK QRKIKSQVLS 300 DVHQSAEGFL AGGKLHQEQS SCAAESWRTR SCISDDVQAN VKILKNNLKD ISMGDCDLVS 360 EGNKTSGLVV SIAMTSDLVR PCSLNAADSN SEHLPDASSL GDTQEYISSS NLIASSGFKG 420 HTVEQGGNDL LQLSNLPDHS TGIKVEHSDY MQTNPQKEGL EDTDMEVFIR ESEKEDLDHV 480 TLQERCNMLL SSTYSVSGDL NGSRWCQDCS ACTSKPCPNS VLHAQDGGFI SRSEKDGTLT 540 NHLGTENCGQ DILGLLQDIS SGPFIHPPSA QLPIGECCAD SVPESNDAKS MNNLMFDSPD 600 SATAGFDPYL QTSLNCQLSI LLQDSHSLEN HENNYISVYQ TSRPEVKPQV QSNKCVSDHS 660 QPLCSELSAQ QVQLKVEPLE EDFPKNISGI NAAVPHSADK NSPEEDCTAS TCTATPCTPD 720 ADMSCLRQTP VDQNDSNQVY NSILPTFPVE VKVEPLEESR INSVPEANAE NHLSLLLSNY 780 STEVFRAHTQ LSKDDHFQVN SSFNGNNSQE NMSTNYLCSD QNSVPENVIN SEAPKLQSSK 840 IPGFMSGTSL ENSCTVSQSS AKAGNHDNIS SSGDSLFEES GRNCSGQVSF LEKEHAGASN 900 ILSNSVQVKT EPLESDLLSM CENHLSSFPE SDTLGANVKR ETLDELSVDV IDPIKVGHAM 960 MPISGIVSNL DYGNNLNCSQ QAVPYYLIDG SINSINAKSS HFSLRRRRKK TATDSVETAL 1020 EEDAPGLLQV LLDKGITVEE IKLYGDVEDD EPLEVSSTDD SFEELETVMT KLFSERASLI 1080 KLSTARHIKG SKAVYCLACL ISLIEQTRYL HFRNSSVEWG WCRDLQSFIF VFKRHNRIVL 1140 ERPEYGYATY FFELVDSLPI PWQIKRLVTA MKLTSCSRTT LIENKPLLVG EDLTEGEACV 1200 LEEYGWTPNT GLGTMLNYCD RVVHDKKNER YSSEWRAKIG RLLMIGHDGG RTVLTNLPKK 1260 VAQFMENRNQ EIKLIN

Sequence ? help Back to Top

Protein Sequence Length: 1276 aa Download sequence Send to blast

MDSAIAIDGS TDKVKIRAGD KCWMDDLDYM PLIKRRRLLL SSTSSPSVPV YSNRPPVDMA  60
VKRVSPGASQ EWPGLPRGVK FDPSDGDLLW HLRAKVGKGE ADPHPLISEF ITSLDKDDGF  120
GYTHPQKLPG VKKDGSVSYF FHRSFKIYNT KNPKHWTVHN DDSEDIFWQK VGKTRPVIVD  180
GSHQGGKKIM VLYASMKKGK KPEKSNWVMH QYHLGTGNGK ERELVVSKIF YENAQGLSPE  240
TVKAIVAEAE TLIVAKLTTG YHETKCNENR VGAGWRELDE YDNCSTEDSK QRKIKSQVLS  300
DVHQSAEGFL AGGKLHQEQS SCAAESWRTR SCISDDVQAN VKILKNNLKD ISMGDCDLVS  360
EGNKTSGLVV SIAMTSDLVR PCSLNAADSN SEHLPDASSL GDTQEYISSS NLIASSGFKG  420
HTVEQGGNDL LQLSNLPDHS TGIKVEHSDY MQTNPQKEGL EDTDMEVFIR ESEKEDLDHV  480
TLQERCNMLL SSTYSVSGDL NGSRWCQDCS ACTSKPCPNS VLHAQDGGFI SRSEKDGTLT  540
NHLGTENCGQ DILGLLQDIS SGPFIHPPSA QLPIGECCAD SVPESNDAKS MNNLMFDSPD  600
SATAGFDPYL QTSLNCQLSI LLQDSHSLEN HENNYISVYQ TSRPEVKPQV QSNKCVSDHS  660
QPLCSELSAQ QVQLKVEPLE EDFPKNISGI NAAVPHSADK NSPEEDCTAS TCTATPCTPD  720
ADMSCLRQTP VDQNDSNQVY NSILPTFPVE VKVEPLEESR INSVPEANAE NHLSLLLSNY  780
STEVFRAHTQ LSKDDHFQVN SSFNGNNSQE NMSTNYLCSD QNSVPENVIN SEAPKLQSSK  840
IPGFMSGTSL ENSCTVSQSS AKAGNHDNIS SSGDSLFEES GRNCSGQVSF LEKEHAGASN  900
ILSNSVQVKT EPLESDLLSM CENHLSSFPE SDTLGANVKR ETLDELSVDV IDPIKVGHAM  960
MPISGIVSNL DYGNNLNCSQ QAVPYYLIDG SINSINAKSS HFSLRRRRKK TATDSVETAL  1020
EEDAPGLLQV LLDKGITVEE IKLYGDVEDD EPLEVSSTDD SFEELETVMT KLFSERASLI  1080
KLSTARHIKG SKAVYCLACL ISLIEQTRYL HFRNSSVEWG WCRDLQSFIF VFKRHNRIVL  1140
ERPEYGYATY FFELVDSLPI PWQIKRLVTA MKLTSCSRTT LIENKPLLVG EDLTEGEACV  1200
LEEYGWTPNT GLGTMLNYCD RVVHDKKNER YSSEWRAKIG RLLMIGHDGG RTVLTNLPKK  1260
VAQFMENRNQ EIKLIN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	33	37	KRRRL

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010916182.1	0.0	uncharacterized protein LOC105041085 isoform X1
TrEMBL	A0A2H3WXQ6	0.0	A0A2H3WXQ6_PHODC; uncharacterized protein LOC103695671 isoform X2
STRING	XP_008775275.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP7479	32	39

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	1e-56	NAC family protein