PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010916183.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

NAC

Protein Properties

Length: 1275aa MW: 140944 Da PI: 4.961

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010916183.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	77.9	2.4e-24	74	213	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.....tks 80 lp+G++F+P+d +l+ +L++kv + + +++ +i+++d +++P++Lp vk++ + yfF+++ k y+t++ k+ + ++ XP_010916183.1 74 LPRGVKFDPSDGDLL-WHLRAKVGKGEadphplISE--FITSLDkddgFGYTHPQKLP-GVKKDGSVSYFFHRSFKIYNTKNPKHWTvhnddSED 164 699**********.8899998777655222..34443333348999**.677788899******98775555423333568 PP NAM 81 gyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +W++ gk+++v++ +g++ g kk++v+y ++ +k+ek++Wvmh+y+l XP_010916183.1 165 IFWQKVGKTRPVIV-DGSHQGGKKIMVLYasMKKGKKPEKSNWVMHQYHL 213 99********.9999******7645677778*******98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	4.32E-27	67	231	IPR003441	NAC domain
PROSITE profile	PS51005	25.142	74	231	IPR003441	NAC domain
Pfam	PF02365	3.3E-11	75	213	IPR003441	NAC domain
PROSITE profile	PS51379	7.248	495	526	IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1275 aa Download sequence Send to blast
MDSAIAIDGS TDKVKIRAGD KCWMDDLDYM PLIKRRRLLL SSTSSPSVPV YSKPPVDMAV 60 KRVSPGASQE WPGLPRGVKF DPSDGDLLWH LRAKVGKGEA DPHPLISEFI TSLDKDDGFG 120 YTHPQKLPGV KKDGSVSYFF HRSFKIYNTK NPKHWTVHND DSEDIFWQKV GKTRPVIVDG 180 SHQGGKKIMV LYASMKKGKK PEKSNWVMHQ YHLGTGNGKE RELVVSKIFY ENAQGLSPET 240 VKAIVAEAET LIVAKLTTGY HETKCNENRV GAGWRELDEY DNCSTEDSKQ RKIKSQVLSD 300 VHQSAEGFLA GGKLHQEQSS CAAESWRTRS CISDDVQANV KILKNNLKDI SMGDCDLVSE 360 GNKTSGLVVS IAMTSDLVRP CSLNAADSNS EHLPDASSLG DTQEYISSSN LIASSGFKGH 420 TVEQGGNDLL QLSNLPDHST GIKVEHSDYM QTNPQKEGLE DTDMEVFIRE SEKEDLDHVT 480 LQERCNMLLS STYSVSGDLN GSRWCQDCSA CTSKPCPNSV LHAQDGGFIS RSEKDGTLTN 540 HLGTENCGQD ILGLLQDISS GPFIHPPSAQ LPIGECCADS VPESNDAKSM NNLMFDSPDS 600 ATAGFDPYLQ TSLNCQLSIL LQDSHSLENH ENNYISVYQT SRPEVKPQVQ SNKCVSDHSQ 660 PLCSELSAQQ VQLKVEPLEE DFPKNISGIN AAVPHSADKN SPEEDCTAST CTATPCTPDA 720 DMSCLRQTPV DQNDSNQVYN SILPTFPVEV KVEPLEESRI NSVPEANAEN HLSLLLSNYS 780 TEVFRAHTQL SKDDHFQVNS SFNGNNSQEN MSTNYLCSDQ NSVPENVINS EAPKLQSSKI 840 PGFMSGTSLE NSCTVSQSSA KAGNHDNISS SGDSLFEESG RNCSGQVSFL EKEHAGASNI 900 LSNSVQVKTE PLESDLLSMC ENHLSSFPES DTLGANVKRE TLDELSVDVI DPIKVGHAMM 960 PISGIVSNLD YGNNLNCSQQ AVPYYLIDGS INSINAKSSH FSLRRRRKKT ATDSVETALE 1020 EDAPGLLQVL LDKGITVEEI KLYGDVEDDE PLEVSSTDDS FEELETVMTK LFSERASLIK 1080 LSTARHIKGS KAVYCLACLI SLIEQTRYLH FRNSSVEWGW CRDLQSFIFV FKRHNRIVLE 1140 RPEYGYATYF FELVDSLPIP WQIKRLVTAM KLTSCSRTTL IENKPLLVGE DLTEGEACVL 1200 EEYGWTPNTG LGTMLNYCDR VVHDKKNERY SSEWRAKIGR LLMIGHDGGR TVLTNLPKKV 1260 AQFMENRNQE IKLIN

Sequence ? help Back to Top

Protein Sequence Length: 1275 aa Download sequence Send to blast

MDSAIAIDGS TDKVKIRAGD KCWMDDLDYM PLIKRRRLLL SSTSSPSVPV YSKPPVDMAV  60
KRVSPGASQE WPGLPRGVKF DPSDGDLLWH LRAKVGKGEA DPHPLISEFI TSLDKDDGFG  120
YTHPQKLPGV KKDGSVSYFF HRSFKIYNTK NPKHWTVHND DSEDIFWQKV GKTRPVIVDG  180
SHQGGKKIMV LYASMKKGKK PEKSNWVMHQ YHLGTGNGKE RELVVSKIFY ENAQGLSPET  240
VKAIVAEAET LIVAKLTTGY HETKCNENRV GAGWRELDEY DNCSTEDSKQ RKIKSQVLSD  300
VHQSAEGFLA GGKLHQEQSS CAAESWRTRS CISDDVQANV KILKNNLKDI SMGDCDLVSE  360
GNKTSGLVVS IAMTSDLVRP CSLNAADSNS EHLPDASSLG DTQEYISSSN LIASSGFKGH  420
TVEQGGNDLL QLSNLPDHST GIKVEHSDYM QTNPQKEGLE DTDMEVFIRE SEKEDLDHVT  480
LQERCNMLLS STYSVSGDLN GSRWCQDCSA CTSKPCPNSV LHAQDGGFIS RSEKDGTLTN  540
HLGTENCGQD ILGLLQDISS GPFIHPPSAQ LPIGECCADS VPESNDAKSM NNLMFDSPDS  600
ATAGFDPYLQ TSLNCQLSIL LQDSHSLENH ENNYISVYQT SRPEVKPQVQ SNKCVSDHSQ  660
PLCSELSAQQ VQLKVEPLEE DFPKNISGIN AAVPHSADKN SPEEDCTAST CTATPCTPDA  720
DMSCLRQTPV DQNDSNQVYN SILPTFPVEV KVEPLEESRI NSVPEANAEN HLSLLLSNYS  780
TEVFRAHTQL SKDDHFQVNS SFNGNNSQEN MSTNYLCSDQ NSVPENVINS EAPKLQSSKI  840
PGFMSGTSLE NSCTVSQSSA KAGNHDNISS SGDSLFEESG RNCSGQVSFL EKEHAGASNI  900
LSNSVQVKTE PLESDLLSMC ENHLSSFPES DTLGANVKRE TLDELSVDVI DPIKVGHAMM  960
PISGIVSNLD YGNNLNCSQQ AVPYYLIDGS INSINAKSSH FSLRRRRKKT ATDSVETALE  1020
EDAPGLLQVL LDKGITVEEI KLYGDVEDDE PLEVSSTDDS FEELETVMTK LFSERASLIK  1080
LSTARHIKGS KAVYCLACLI SLIEQTRYLH FRNSSVEWGW CRDLQSFIFV FKRHNRIVLE  1140
RPEYGYATYF FELVDSLPIP WQIKRLVTAM KLTSCSRTTL IENKPLLVGE DLTEGEACVL  1200
EEYGWTPNTG LGTMLNYCDR VVHDKKNERY SSEWRAKIGR LLMIGHDGGR TVLTNLPKKV  1260
AQFMENRNQE IKLIN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	33	37	KRRRL

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010916183.1	0.0	uncharacterized protein LOC105041085 isoform X2
TrEMBL	A0A2H3WXQ6	0.0	A0A2H3WXQ6_PHODC; uncharacterized protein LOC103695671 isoform X2
STRING	XP_008775275.1	0.0	(Phoenix dactylifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	1e-56	NAC family protein