PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010916577.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family GeBP
Protein Properties Length: 354aa    MW: 38586.2 Da    PI: 10.2261
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010916577.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57345.62e-14138204469
          DUF573   4 qrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkv 69 
                     qr   ++  ++lL++ idf++ tg+ p   ++  fyefvk s+    sk+q+ +K+r+L++Kf+k  
  XP_010916577.1 138 QRRLADDNAVALLRAAIDFRSGTGSIPLPaNMGIFYEFVKASLPTPLSKDQVYNKLRHLRRKFQKSG 204
                     778889999****************99998*********************************9864 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045048.8E-11139224IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    Send to blast
MEVQERKVAK KPSKSKSKSK SSKHHPSSSS EPLETKNNSK PNPDPTSPNP NGGPPPAPAA  60
RKDPNPNPNP NPKSSKPPKP TPSSPILPKS SKPPKPDAVM PDDPSSDPAS PSRKSDRKRK  120
ARDFSDEEPS GKSSQAGQRR LADDNAVALL RAAIDFRSGT GSIPLPANMG IFYEFVKASL  180
PTPLSKDQVY NKLRHLRRKF QKSGPPGSGP NDGLVHGLST EIWGPVDKKD DNKEEKKVKE  240
GTSVAVIKNG DAAKVAAEEE EVQQQQGDGE ERGVHGLDSL PYVSSAAAEH WKENGLWGVS  300
WEAGLKRMDP SKARVLEEKW RRQLGDEMKL QMDWSKTNRE LLALLNDAYK GMSA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010916577.10.0STOREKEEPER protein
TrEMBLA0A2H3YPU41e-146A0A2H3YPU4_PHODC; uncharacterized protein LOC103716014
STRINGXP_008802063.11e-147(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26822763
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.13e-11DNA-binding storekeeper protein-related transcriptional regulator