PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010917433.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family Trihelix
Protein Properties Length: 376aa    MW: 41074.7 Da    PI: 10.3893
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010917433.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix50.55.3e-1690178186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspk...qCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +W++  + +Li+a  e+  +l+rg+lk+++W+ev++++ ++ g++++pk   qCk++++ l+k+yk +k    +  + ++s +p+f +l+
  XP_010917433.1  90 CWSEGATSTLIDAWGERYLELSRGNLKQKHWQEVADAVtSRDGYTKTPKtdvQCKNRIDTLKKKYKIEKSKIASS-AAATSPWPFFGRLD 178
                     7*************************************888899998865559****************999996.677779****9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138377.2E-2688179No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0010431Biological Processseed maturation
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    Send to blast
MEDDDDARSE SPSKSPSQSQ SPPPSPPTQL VSVVASSSAA ATATSHPNGR AAVEPVTVAA  60
PLQHTLTLAL PIQRPSGGGG GGGGGGREDC WSEGATSTLI DAWGERYLEL SRGNLKQKHW  120
QEVADAVTSR DGYTKTPKTD VQCKNRIDTL KKKYKIEKSK IASSAAATSP WPFFGRLDVL  180
LGPNHKPTST PALPAPANPS NPHHPSKIPS GVPLRPPIQP QFPQRHRTPH RSNKRGRSPP  240
SVSSRSAGLS ADSSDGLPPE PAVNGKRRKR EAEVEDEEEG LQELTEAILR FAKVYERVES  300
SKLQQAMEME KQRMAFAREL EVQRMQFFMK TQMELTQLKS RHLGRRRRRD EAGASGNHRR  360
HHQNDSSNSN TSHNSG
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00356DAPTransfer from AT3G14180Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010917433.10.0trihelix transcription factor ASIL2
TrEMBLA0A2H3YT261e-164A0A2H3YT26_PHODC; trihelix transcription factor ASIL2
STRINGXP_008803390.11e-165(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP24043069
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14180.16e-34sequence-specific DNA binding transcription factors