PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010917440.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

WRKY

Protein Properties

Length: 158aa MW: 16748.9 Da PI: 8.9567

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010917440.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	34.5	4.2e-11	133	154	1	22
---SS-EEEEEEE--TT-SS-E CS WRKY 1 ldDgynWrKYGqKevkgsefpr 22 ldDgy+WrKYGqK vk+s +pr XP_010917440.1 133 LDDGYRWRKYGQKAVKNSIYPR 154 59*******************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	4.8E-12	119	154	IPR003657	WRKY domain
SuperFamily	SSF118290	2.35E-9	126	155	IPR003657	WRKY domain
PROSITE profile	PS50811	12.668	128	154	IPR003657	WRKY domain
SMART	SM00774	0.0074	133	158	IPR003657	WRKY domain
Pfam	PF03106	3.7E-7	134	154	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 158 aa Download sequence Send to blast
MSMMEPLEGD APLPLPHVPG FSAPFAPPGS SQNCPSTLSC QQQQQQEPSS LGCGEAPAID 60 WASLFLPSSI GLQQPTPAGL LQSVERPSEG EGNNATKVGG GGGCGKEKVK GGRAKKVSKP 120 RFAFQTRSAN DILDDGYRWR KYGQKAVKNS IYPRFVSS

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010917440.3	1e-110	probable WRKY transcription factor 75
TrEMBL	A0A2H3WXB6	4e-66	A0A2H3WXB6_PHODC; probable WRKY transcription factor 24
STRING	XP_008775118.1	6e-67	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP37506	3	3

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46130.1	3e-19	WRKY DNA-binding protein 43