PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010917545.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 155aa    MW: 17254.3 Da    PI: 10.5067
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010917545.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY37.83.7e-12105127123
                     ---SS-EEEEEEE--TT-SS-EE CS
            WRKY   1 ldDgynWrKYGqKevkgsefprs 23 
                     ldDgy+WrKYGqK vk+++fpr 
  XP_010917545.1 105 LDDGYRWRKYGQKAVKNNKFPRT 127
                     59*******************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.7E-1390127IPR003657WRKY domain
SuperFamilySSF1182902.62E-1097127IPR003657WRKY domain
PROSITE profilePS5081113.31100140IPR003657WRKY domain
SMARTSM007741.4E-5105143IPR003657WRKY domain
PfamPF031063.4E-8106127IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000122Biological Processnegative regulation of transcription from RNA polymerase II promoter
GO:0010055Biological Processatrichoblast differentiation
GO:0032107Biological Processregulation of response to nutrient levels
GO:0043620Biological Processregulation of DNA-templated transcription in response to stress
GO:0048527Biological Processlateral root development
GO:0005634Cellular Componentnucleus
GO:0001046Molecular Functioncore promoter sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    Send to blast
MEHYPILFPP QPSSSSSSYS SHLTHLPSNM LSNNQVFGSL HHNNSSGLLG LREDAKVSSL  60
EGPGAPQMES FGGVENEVKT GRKKGEKKVR RPRFAFQTRS QVDILDDGYR WRKYGQKAVK  120
NNKFPRTCGD LKPAAITQKG ASNWRIWQPQ EGGAN
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00506DAPTransfer from AT5G13080Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010917545.21e-113probable WRKY transcription factor 12 isoform X2
TrEMBLA0A2H3Z8643e-49A0A2H3Z864_PHODC; probable WRKY transcription factor 75
STRINGXP_008809548.15e-50(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.17e-20WRKY DNA-binding protein 75