PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010917575.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 358aa    MW: 40188.9 Da    PI: 10.3025
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010917575.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.32.4e-31291348258
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 
                      D+++WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp+++++tYegeHnh
  XP_010917575.1 291 ADEFSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCVDDPSMLIVTYEGEHNH 348
                     69************************9988**************************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105334.7E-17243288IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.801.0E-33278349IPR003657WRKY domain
PROSITE profilePS5081129.7285348IPR003657WRKY domain
SuperFamilySSF1182905.62E-27288349IPR003657WRKY domain
SMARTSM007742.5E-39290350IPR003657WRKY domain
PfamPF031062.5E-27292348IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    Send to blast
MCCFEMEEVE IANRTAVESC HMVLNLLSQS QDKLRLYRNL VAETEEAVSK FKKVVSKLSN  60
EAGHARVRRL NKTLSPFNHK IFLDSPIVSR PSPSPVPLQL LPREPVELPV RELGSTTKIP  120
QQIPQRMFLE NPVLEGDVAS RGTLQLGLKA PPTHLHFLQQ QQNNQKFQLQ QQFKFQSEMY  180
SRSSSGINLK FDNSSCTATG SSSRSFVSSL SVDRSVASLD GRPFHLISGP ESSNQINLNQ  240
PPRRRCTGRG EDGSGRCATA GRCHCSKKRK LRVRRSIKVP AISNKLSDIP ADEFSWRKYG  300
QKPIKGSPHP RGYYKCSSMR GCPARKHVER CVDDPSMLIV TYEGEHNHGR LLSQSAHT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-20283348771WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010917575.10.0protein WRKY1
RefseqXP_010917576.10.0protein WRKY1
RefseqXP_010917578.10.0protein WRKY1
RefseqXP_019704391.10.0protein WRKY1
SwissprotQ32SG41e-115WRKY1_MAIZE; Protein WRKY1
TrEMBLA0A2H3YRQ70.0A0A2H3YRQ7_PHODC; protein WRKY1
STRINGXP_008802836.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP102503242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04670.11e-78WRKY DNA-binding protein 39