PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010918330.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

G2-like

Protein Properties

Length: 279aa MW: 30860.4 Da PI: 7.2046

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010918330.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	49.6	8.7e-16	12	41	26	55
G2-like 26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55 +AtPk +l+lm+v gLt++hvkSHLQ+YR+ XP_010918330.1 12 EATPKLVLQLMNVRGLTISHVKSHLQMYRS 41 69***************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
TIGRFAMs	TIGR01557	6.5E-11	11	41	IPR006447	Myb domain, plants
Gene3D	G3DSA:1.10.10.60	8.7E-15	12	45	IPR009057	Homeodomain-like
SuperFamily	SSF46689	3.4E-5	13	44	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence Send to blast
MPLRNLEDRK VEATPKLVLQ LMNVRGLTIS HVKSHLQMYR SMRNDMGRQA SESQARKHSC 60 EANDGGADEQ DDGSSSPPTK PTKEFQSQFV YFPHPPLKRA RMETQATSKN LQCSQGTSET 120 VTFPYCFDDY MQAMAVGRGI KEEGLRWQKD AVETGLLADH HPSKLKVLGY MVEESGPLKT 180 GKPSDQNLVS AGKLKSEGSY KNGCRSYVSL SFKERSEERD EVDDCSLSLS LSLHPTQRSN 240 TSSASESSGA ISSRHFSECS GYSEGPRINL DLSMSFSGS

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010918330.1	0.0	transcription repressor KAN1 isoform X3
TrEMBL	A0A3Q0ICF2	1e-149	A0A3Q0ICF2_PHODC; myb family transcription factor PHL8 isoform X3
STRING	XP_008805079.1	1e-148	(Phoenix dactylifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40260.1	6e-12	G2-like family protein