PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010918445.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

Dof

Protein Properties

Length: 293aa MW: 32151.7 Da PI: 8.7774

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010918445.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	111.7	3.3e-35	48	104	5	61
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 l cprC+s+ntkfCyynnys sqPr+fCk+Crr+Wt+GG+lrnvPvGggr++++++ XP_010918445.1 48 PLVCPRCESSNTKFCYYNNYSKSQPRHFCKTCRRHWTEGGTLRNVPVGGGRKNKRQK 104 578**********************************************98776654 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-21	49	102	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	27.438	49	103	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	5.3E-31	49	102	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	51	87	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence Send to blast
MGLSSNQASA TGLDWSQDIL RNGGLEMPKL ANHARNQQQQ QQRQHWPPLV CPRCESSNTK 60 FCYYNNYSKS QPRHFCKTCR RHWTEGGTLR NVPVGGGRKN KRQKNTPTTS TSGEGSAADN 120 NDTKPGITNS GSVMPPQPQR HQKQSLLPFA RDHCSSIFPE VLRQVLLRPP SMPLQAEYSV 180 AGSFMGSPQA TDTPLPPPSQ FTTTMPLTIN SYSSIVHPFS TTSSSSSYFP YLSISEGPST 240 NINISMGSSW PVAPPPPPVS DPSSAYWSGW EDDISGYATT ELKLPHGDKT EQP

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010918445.1	0.0	dof zinc finger protein 4
TrEMBL	A0A2H3XY40	1e-133	A0A2H3XY40_PHODC; dof zinc finger protein 1-like
STRING	XP_008790500.1	1e-134	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP140	37	367

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07640.1	2e-28	Dof family protein