PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010918803.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 129aa    MW: 14547.2 Da    PI: 8.4498
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010918803.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2636.3e-201666255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr+++ +g+++AeIrd +    +  r++lg+f taeeAa+a+++a+ +++g
  XP_010918803.1 16 KYRGVRRRP-WGKYAAEIRDSTR---HgVRVWLGTFSTAEEAARAYDRAAYAMRG 66
                    8********.**********422...25*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003802.1E-361680IPR001471AP2/ERF domain
CDDcd000181.86E-191675No hitNo description
SuperFamilySSF541716.15E-241675IPR016177DNA-binding domain
PfamPF008471.1E-141666IPR001471AP2/ERF domain
PROSITE profilePS5103223.7621674IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.6E-321675IPR001471AP2/ERF domain
PRINTSPR003671.0E-111728IPR001471AP2/ERF domain
PRINTSPR003671.0E-114056IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    Send to blast
MEDSRKRKEK EEGEVKYRGV RRRPWGKYAA EIRDSTRHGV RVWLGTFSTA EEAARAYDRA  60
AYAMRGPLAV LNFPEEIHSF STGSSSSPRG RGSGSSETEQ GKQVIELECL DDKVLEELLE  120
PEEKGGKKK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-341611414114Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
149RKRKEK
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010918803.13e-89ethylene-responsive transcription factor ERF096-like
SwissprotQ9LTC52e-37ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A2H3Z1381e-48A0A2H3Z138_PHODC; ethylene-responsive transcription factor ERF096-like
STRINGXP_008806913.12e-49(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43410.13e-19ERF family protein
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]