PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010919169.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

bZIP

Protein Properties

Length: 497aa MW: 53245.3 Da PI: 6.9574

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010919169.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.5	9.4e-11	386	444	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr +r NR +A rs +RK ++i+eLe kv+ L++e ++L +l l+ +a l s++ XP_010919169.1 386 KRVKRILANRQSAARSKERKMKYIAELEHKVQILQTEATTLSAQLTLLQGDSAGLSSQN 444 899*********************************************99999888887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	5.8E-17	382	446	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.277	384	447	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	2.7E-10	386	444	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	5.2E-11	386	443	No hit	No description
SuperFamily	SSF57959	1.27E-11	386	436	No hit	No description
CDD	cd14703	3.42E-25	387	434	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 497 aa Download sequence Send to blast
MEDAARNDLT RRFRGNPSVS TSNPQQNASD GPQIGGPYHH LGPPLGPEPC RRPGIPPASP 60 FSHFLTSAAR SPPSLAAGGP FNHPRSLSPP AFFSLDSVPP LSPPPCRDCT PTTSLSDSVS 120 ADVSMEDHDA SSRSPPLPPK AGGAAWAAPT GDGLLPPKAH RRSQSEIPFA FFQSSPSPAT 180 SPLPPPASAE APPPQMVKLE PNWDWCMNAE AAGDKKPEGD SGDDLFDAYL NLDSLDTLDS 240 SEDKREDLNS GASGSKTNGD SSENEAESSV NGSGVKFRPH HGPSVEKREG TKRSAVGDPG 300 PIGSGNRHCR SLSMDSFIGK SNFGEESPKL STSPGFLAAQ TLQANSKDGA SNVFSLEFGK 360 GEFSPAEMKK IMANERLVEM ALTDPKRVKR ILANRQSAAR SKERKMKYIA ELEHKVQILQ 420 TEATTLSAQL TLLQGDSAGL SSQNNELKFR LQAMEQQAQL RDATGRSHLL NLNQGGNKRQ 480 HSQILLIDIR LYLLITR

Sequence ? help Back to Top

Protein Sequence Length: 497 aa Download sequence Send to blast

MEDAARNDLT RRFRGNPSVS TSNPQQNASD GPQIGGPYHH LGPPLGPEPC RRPGIPPASP  60
FSHFLTSAAR SPPSLAAGGP FNHPRSLSPP AFFSLDSVPP LSPPPCRDCT PTTSLSDSVS  120
ADVSMEDHDA SSRSPPLPPK AGGAAWAAPT GDGLLPPKAH RRSQSEIPFA FFQSSPSPAT  180
SPLPPPASAE APPPQMVKLE PNWDWCMNAE AAGDKKPEGD SGDDLFDAYL NLDSLDTLDS  240
SEDKREDLNS GASGSKTNGD SSENEAESSV NGSGVKFRPH HGPSVEKREG TKRSAVGDPG  300
PIGSGNRHCR SLSMDSFIGK SNFGEESPKL STSPGFLAAQ TLQANSKDGA SNVFSLEFGK  360
GEFSPAEMKK IMANERLVEM ALTDPKRVKR ILANRQSAAR SKERKMKYIA ELEHKVQILQ  420
TEATTLSAQL TLLQGDSAGL SSQNNELKFR LQAMEQQAQL RDATGRSHLL NLNQGGNKRQ  480
HSQILLIDIR LYLLITR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010919169.1	0.0	probable transcription factor PosF21 isoform X2
TrEMBL	A0A2H3X9E9	0.0	A0A2H3X9E9_PHODC; transcription factor RF2a-like
STRING	XP_008780305.1	0.0	(Phoenix dactylifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38900.3	5e-70	bZIP family protein