PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010919217.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 224aa    MW: 23569.9 Da    PI: 5.1109
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010919217.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.11.6e-1653103156
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                     + y+GVr  +++g+Wv+eIr+p+    +  r++lg+f tae+Aa a++ a+ +l+g+
  XP_010919217.1  53 PSYRGVR--SRSGKWVSEIREPR----KaNRIWLGTFPTAEMAAVAYDVAAHALRGA 103
                     57****6..668*********95....358************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.4E-953102IPR001471AP2/ERF domain
CDDcd000182.12E-2753112No hitNo description
PROSITE profilePS5103220.57454110IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.2E-2854111IPR001471AP2/ERF domain
SMARTSM003802.1E-2954116IPR001471AP2/ERF domain
SuperFamilySSF541716.28E-1954112IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    Send to blast
MADHPPSHVH GGDRQTPSQP PERQPAFVQG ANAPQPEPPP PSPTRGHIGT HRPSYRGVRS  60
RSGKWVSEIR EPRKANRIWL GTFPTAEMAA VAYDVAAHAL RGADAVLNFP DDISSRPTPA  120
SVSPSDIRAA AAAAAAELLP RPERQEDVAA AGGSRAPGSS EAGGSSGSGQ RKEGEFIDEE  180
EIFGMPNLLA NMAEGMLMSP PRLSPTGSDD SPDASEGESL WSYP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1548114876Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00558DAPTransfer from AT5G52020Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010919217.11e-159ethylene-responsive transcription factor ERF027
SwissprotQ9SJR03e-42ERF24_ARATH; Ethylene-responsive transcription factor ERF024
TrEMBLA0A2H3YSP01e-110A0A2H3YSP0_PHODC; ethylene-responsive transcription factor ERF027-like
STRINGXP_008803287.11e-111(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP36542762
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.12e-30ERF family protein