PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010919711.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 283aa    MW: 31002.1 Da    PI: 4.9456
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010919711.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.13e-20123174155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GVr+++ +g+++AeIrdp+ +g   r++lg+f+ta eAa+a+++a+ +++g
  XP_010919711.1 123 SRYRGVRRRP-WGKFAAEIRDPKRRG--SRVWLGTFDTAIEAARAYDRAAFQMRG 174
                     79********.**********96554..*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.60E-30123183No hitNo description
SuperFamilySSF541717.85E-23123183IPR016177DNA-binding domain
PfamPF008478.3E-15123174IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.6E-32124183IPR001471AP2/ERF domain
PROSITE profilePS5103224.302124182IPR001471AP2/ERF domain
SMARTSM003801.3E-36124188IPR001471AP2/ERF domain
PRINTSPR003671.3E-10125136IPR001471AP2/ERF domain
PRINTSPR003671.3E-10148164IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009409Biological Processresponse to cold
GO:0010200Biological Processresponse to chitin
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    Send to blast
MASIGDDVST LDLIREHLLG DPTISLDDLL SPLPPPSAPN DIAVGDYLHA TPPFHDSYGG  60
QSSCSFADPV APMIRFCGDS PQASPPSDRR PSLTISLPPV RKVELEWTEV APAEKPAEYD  120
DGSRYRGVRR RPWGKFAAEI RDPKRRGSRV WLGTFDTAIE AARAYDRAAF QMRGCKAILN  180
FPNEIGSSSR WMPPPPAPLE AAVGKRKREA EAEEMRPVKK ERSPEIEAAD QVVEENIPSL  240
CPLTPSSWES VWNGADVTGI FNLPMLSPLS PHPSLGFPQL IVS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-271231891379Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00549DAPTransfer from AT5G47230Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010919711.10.0ethylene-responsive transcription factor ERF105
TrEMBLA0A2H3XNJ51e-103A0A2H3XNJ5_PHODC; ethylene-responsive transcription factor ERF105-like
STRINGXP_008779563.11e-116(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.13e-30ERF family protein