PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010919858.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

G2-like

Protein Properties

Length: 354aa MW: 39599.2 Da PI: 8.1136

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010919858.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	97.1	1.3e-30	183	237	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWt+eLHe+Fveav++LGG+ kAtPk il lmk +gLt+ h+kSHLQkYR+ XP_010919858.1 183 KQRIRWTHELHEQFVEAVNHLGGAMKATPKGILALMKSQGLTILHIKSHLQKYRT 237 79****************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	10.674	180	240	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	1.5E-27	181	238	IPR009057	Homeodomain-like
SuperFamily	SSF46689	1.97E-15	182	237	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	3.7E-24	183	238	IPR006447	Myb domain, plants
Pfam	PF00249	1.6E-8	187	236	IPR001005	SANT/Myb domain
Pfam	PF14379	7.3E-19	270	314	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence Send to blast
MNPQGKMENS YTSNEEVICS PSFESLTSGF PFPDFMNNYY RASHGGVVLQ QSHHSNYQSS 60 LSGLFNGSTQ FLQPRQHLGL HHQTITGKMT NFNYESSGKL DAASSIYFPT DCQAQDNDNV 120 RSLQSKGTSL ELACTGTRIG NNSDLSWGVG GSKHGEMFYS SNSQTGTTAV HSSMQSCGAA 180 TGKQRIRWTH ELHEQFVEAV NHLGGAMKAT PKGILALMKS QGLTILHIKS HLQKYRTAKC 240 VPNFHGGKNW KRINNDMMPL SNFRGNVGLQ ISETLRMQMD VQKSLHDHLE FQKKLQMRIE 300 EHANYLENMF VQQKSCSFFE NHNSTKGVDQ CIAERSSNGE YENNKEVILA KSEP

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence Send to blast

MNPQGKMENS YTSNEEVICS PSFESLTSGF PFPDFMNNYY RASHGGVVLQ QSHHSNYQSS  60
LSGLFNGSTQ FLQPRQHLGL HHQTITGKMT NFNYESSGKL DAASSIYFPT DCQAQDNDNV  120
RSLQSKGTSL ELACTGTRIG NNSDLSWGVG GSKHGEMFYS SNSQTGTTAV HSSMQSCGAA  180
TGKQRIRWTH ELHEQFVEAV NHLGGAMKAT PKGILALMKS QGLTILHIKS HLQKYRTAKC  240
VPNFHGGKNW KRINNDMMPL SNFRGNVGLQ ISETLRMQMD VQKSLHDHLE FQKKLQMRIE  300
EHANYLENMF VQQKSCSFFE NHNSTKGVDQ CIAERSSNGE YENNKEVILA KSEP

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	3e-23	182	239	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	3e-23	182	239	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	3e-23	182	239	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	3e-23	182	239	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	3e-23	182	239	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	3e-23	182	239	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	3e-23	182	239	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	3e-23	182	239	1	58	Protein PHOSPHATE STARVATION RESPONSE 1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010919858.1	0.0	protein PHOSPHATE STARVATION RESPONSE 2
TrEMBL	A0A2H3XJG5	0.0	A0A2H3XJG5_PHODC; protein PHOSPHATE STARVATION RESPONSE 1-like isoform X1
STRING	XP_008784667.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP50785	2	2

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	3e-46	G2-like family protein