PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010919985.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

G2-like

Protein Properties

Length: 331aa MW: 36989.3 Da PI: 9.7242

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010919985.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.3	3.1e-32	172	225	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_010919985.1 172 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 225 9****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	1.68E-15	169	225	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	1.4E-28	170	225	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	2.0E-23	172	225	IPR006447	Myb domain, plants
Pfam	PF00249	2.0E-7	173	224	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence Send to blast
MELFPVQPDL SLQISPPNSK PTSGWSRSDE ALDLGFWRRA MDSASSSIKS STSTSTPKAN 60 TGGFDLSLAN PSVASNTNTT SYLPHQHHFH LHHHQKFLHD GYRQDLGSIR PIRGIPVYYN 120 PPSFSFLQNQ LNQQHLCDSS STASSIPYVV QGMPRSPRFL PRFPAKRGMR APRMRWTTTL 180 HARFVHAVEL LGGHERATPK SVLELMDVKD LTLAHVKSHL QMYRTVKTTD RPATSSEISD 240 DNLLNIHASE ASVQHERSGG SNSTRSGLWN NTSSRGGWFH DKPKDSTTGS INSFEDMQYK 300 SFEMVSDLNS SCVSEMSTKK PNLEFTLGRP H

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	1e-16	173	227	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	1e-16	173	227	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	1e-16	173	227	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	1e-16	173	227	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	1e-16	173	227	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	1e-16	173	227	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	1e-16	173	227	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	1e-16	173	227	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	1e-16	173	227	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	1e-16	173	227	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	1e-16	173	227	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	1e-16	173	227	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010919983.1	0.0	probable transcription factor KAN2 isoform X1
TrEMBL	A0A3Q0ICH3	0.0	A0A3Q0ICH3_PHODC; probable transcription factor KAN2
STRING	XP_008800121.1	0.0	(Phoenix dactylifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17695.1	5e-55	G2-like family protein