PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010920017.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 422aa    MW: 44617.9 Da    PI: 6.8579
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010920017.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1673.1e-21310372163
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     e+elkr+rrkq+NRe+ArrsR+RK+ae+eeL+++v++L++eN aL+ e++++kk  +++ +++
  XP_010920017.1 310 ERELKRQRRKQSNRESARRSRLRKQAECEELARRVEALKEENIALRAEVDRIKKDHEQVLAQN 372
                     89*******************************************************998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077776.4E-34198IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165968.9E-49137274No hitNo description
Gene3DG3DSA:1.20.5.1702.3E-17303368No hitNo description
SMARTSM003381.4E-19310374IPR004827Basic-leucine zipper domain
PfamPF001702.0E-19310372IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.978312375IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.13E-10313368No hitNo description
CDDcd147021.34E-23315365No hitNo description
PROSITE patternPS000360317332IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    Send to blast
MGSSENDTPS KAPKASASQE QPPATNSSPT TTVYPDWSGF QAYSPIPPHG FFHSPVASSP  60
QAHPYMWGAQ HLMPPYGTPP SPYVMYPHAG LYAHPSIPPG AHPFSPYAVP STNGNSEASG  120
AVSGGMEGDG KSSEGKERSP IKRSKGSLGS LNMITGKNNN DLGKTSRAVN GVFSQSSESG  180
SEGSSDGSDD NSQNDSQQKM CGGQDSFDEA SQNGTTTCGS QNGVARAPTQ VTSSQTIPIM  240
PMPVAGVPGG VAGPTTNLNI GMDYWNTSTP SPMPPIRGKA PAATGAGAMV PGGLSGSREN  300
APSELWMQDE RELKRQRRKQ SNRESARRSR LRKQAECEEL ARRVEALKEE NIALRAEVDR  360
IKKDHEQVLA QNTSLKEKLG ETTKGSEDAR LDKNSQHSVD DTQKHSDSIV KAGQADTAPN  420
GC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1326332RRSRLRK
2326333RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in responses to fungal pathogen infection and abiotic stresses. {ECO:0000269|Ref.2}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced during incompatible interaction with the fungal pathogen Puccinia striiformis (Ref.2). Induced by abscisic acid (ABA), ethylene, cold stress, salt stress and wounding (Ref.2). {ECO:0000269|Ref.2}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010920017.10.0bZIP transcription factor 16 isoform X2
SwissprotA0A3B6KF131e-144BZP1A_WHEAT; bZIP transcription factor 1-A
TrEMBLA0A3Q0I3Q40.0A0A3Q0I3Q4_PHODC; bZIP transcription factor 16-like isoform X2
STRINGXP_008788461.10.0(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-110basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Appels R, et al.
    Shifting the limits in wheat research and breeding using a fully annotated reference genome.
    Science, 2018.
    [PMID:30115783]