PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010920047.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 419aa    MW: 45716.1 Da    PI: 5.5777
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010920047.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.96.6e-31214272259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
  XP_010920047.1 214 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 272
                     699************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.4E-31208274IPR003657WRKY domain
PROSITE profilePS5081133.109208274IPR003657WRKY domain
SuperFamilySSF1182902.62E-26211274IPR003657WRKY domain
SMARTSM007741.4E-37213273IPR003657WRKY domain
PfamPF031068.6E-26215272IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    Send to blast
MCDFFWQRME NDQGDLADIV RAGGRGGPSS TELPIADWQQ LLSEPMTFPP STQGPTSDFG  60
DPFANLRDPL LDQLVGSEVF DDPSTRSGPV NMSSEGGDAG GGNGLVKQKK KMLMGEEMTR  120
PCNIFSRVLQ ISPGTSKTTP LSPRAIRPSP IVTGEMVKMV AGSVGCQVDP TAGVQISSPR  180
TTGIKRRKSQ AKKVVCIPAP AAATSRPSGE VVPSDLWAWR KYGQKPIKGS PYPRGYYRCS  240
SSKGCSARKQ VERSRTDPNM LVITYTSEHN HPWPTQRNAL AGSTRSQPSK SSSSSSKNSP  300
HNQKPHSTGL KEESKETTSS SAPAIKEEMS ELEKAIDPVE DNEFDQVFQQ SYNPIIPDSD  360
QPDDFFADLA ELEPDPMSLI FSKGFMETKP DEERGERASD PFSMFDWPGN SFGEARKGL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B9e-26188275280Disease resistance protein RRS1
5w3x_D9e-26188275280Disease resistance protein RRS1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010920047.10.0probable WRKY transcription factor 14
TrEMBLA0A2H3XTU50.0A0A2H3XTU5_PHODC; probable WRKY transcription factor 14
STRINGXP_008788702.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP25923888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30650.14e-84WRKY DNA-binding protein 14