PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010920180.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family CPP
Protein Properties Length: 216aa    MW: 23240.5 Da    PI: 5.8055
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010920180.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR34.24.9e-112291340
             TCR 13 ClkkYCeCfaagkkCseeCkCedCkNke 40
                    C+k+YCeCf+a++ Cs+ C+CedCkN+ 
  XP_010920180.1  2 CMKNYCECFKAHVGCSSVCRCEDCKNTF 29
                    **************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5163414.48130IPR005172CRC domain
SMARTSM011141.1E-4131IPR033467Tesmin/TSO1-like CXC domain
PfamPF036387.0E-8228IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    Send to blast
MCMKNYCECF KAHVGCSSVC RCEDCKNTFG AKNASGEIGE MKGESETVKV KSDMTKPEQC  60
HTGFSCLTPC IQSSIQNEPN PSVAPGTSVL SSYTDSWNSP IDSTSRTSFV KAGQGTQTFS  120
SHYQASGSHD AENFGSFLPH CDHSGRNVFG PSSNSNLLQM NVIQGRDHLS VNSLPLTGES  180
SNELDSDSNC GPCNNLEHNY DILKDSSSNI KPVKTS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029120073.11e-157protein tesmin/TSO1-like CXC 2
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22760.14e-10Tesmin/TSO1-like CXC domain-containing protein