PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010920615.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

Dof

Protein Properties

Length: 344aa MW: 35824 Da PI: 9.3921

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010920615.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.1	4.6e-39	71	131	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e alkcprCdstntkfCy+nnyslsqPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+++ XP_010920615.1 71 PEPALKCPRCDSTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRTK 131 67899*****************************************************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-36	55	129	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.1E-32	74	129	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.739	75	129	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	77	113	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence Send to blast
MVFPTVPVYL DPRNWNQQAH HQPQSSSGGV SGEPLQPPTG VVAARPEGPA AGLVRPGSMV 60 DRARLAKIAQ PEPALKCPRC DSTNTKFCYF NNYSLSQPRH FCKTCRRYWT RGGALRNVPV 120 GGGCRRNKRT KPAGSSTSKS STTTTTTDRQ AGASSSTSST ATTVVGISGA IPSNLPMPPQ 180 MPFMAATLHP LAEYNTPSIG LSFAGIQPVD AMDYQVGASS SSAGGGVGLE QWRLPQIQQF 240 PFFGGLEPPP PPPAPVSGLY PFDGEGSGVD GGAFAKATGS GLITQLASVK MEDNQHGLGL 300 PRQYPGVPRN DQYWGSSSGG GSSTGSGWAP DLSGFNSSSA GNLL

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence Send to blast

MVFPTVPVYL DPRNWNQQAH HQPQSSSGGV SGEPLQPPTG VVAARPEGPA AGLVRPGSMV  60
DRARLAKIAQ PEPALKCPRC DSTNTKFCYF NNYSLSQPRH FCKTCRRYWT RGGALRNVPV  120
GGGCRRNKRT KPAGSSTSKS STTTTTTDRQ AGASSSTSST ATTVVGISGA IPSNLPMPPQ  180
MPFMAATLHP LAEYNTPSIG LSFAGIQPVD AMDYQVGASS SSAGGGVGLE QWRLPQIQQF  240
PFFGGLEPPP PPPAPVSGLY PFDGEGSGVD GGAFAKATGS GLITQLASVK MEDNQHGLGL  300
PRQYPGVPRN DQYWGSSSGG GSSTGSGWAP DLSGFNSSSA GNLL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	124	131	RRNKRTKP

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010920614.1	0.0	dof zinc finger protein DOF5.1
TrEMBL	A0A2H3X7N2	1e-146	A0A2H3X7N2_PHODC; dof zinc finger protein DOF5.1-like isoform X2
STRING	XP_008779546.1	1e-146	(Phoenix dactylifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.1	2e-53	OBF-binding protein 3