PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010920800.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

bHLH

Protein Properties

Length: 247aa MW: 27133.9 Da PI: 9.5349

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010920800.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.8	3.4e-12	65	109	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h+e+E+rRR+riN +++Lr+++P a K++Ka+ L ++++ +k+L XP_010920800.1 65 HSEAEKRRRERINAHLSTLRRMIPDA-----DKMDKASLLGRVIDQVKDL 109 9**********************9.....8***********99988 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	3.27E-13	57	114	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	15.231	60	109	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	9.2E-10	65	109	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	2.08E-12	65	112	No hit	No description
Gene3D	G3DSA:4.10.280.10	1.4E-12	65	112	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	4.9E-12	66	115	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:3.30.70.260	1.8E-6	151	209	No hit	No description
CDD	cd04873	4.00E-11	152	219	No hit	No description
SuperFamily	SSF55021	6.87E-6	152	211	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence Send to blast
MAQCFPPYGW SQEGKKRSSF PKGSLLLPRP SNSAPPSLDF GASCPFSSSS VSGRSATAAR 60 ALKIHSEAEK RRRERINAHL STLRRMIPDA DKMDKASLLG RVIDQVKDLK RKASDIGNCF 120 QVPAEVNEVT VECNQGNGHP GADHGSLYIK ATICCNDRPD LFTDLTQAFH DLRLRTIRAD 180 ITSLGGRVQN VFMLYGKEGN VSVCLSSLKE SIEEALSRVV SPDMAPTNVV PSKKQKLLES 240 HYSRVTF

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010920800.1	0.0	transcription factor bHLH51
TrEMBL	A0A2H3Y3J8	1e-128	A0A2H3Y3J8_PHODC; transcription factor bHLH51-like
STRING	XP_008792668.1	1e-129	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3347	36	78

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40200.1	3e-37	bHLH family protein