PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010920992.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family G2-like
Protein Properties Length: 332aa    MW: 37879.4 Da    PI: 9.9459
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010920992.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like95.54.1e-303388255
         G2-like  2 prlrWtpeLHerFveaveqLGGsek..AtPktilelmkvkgLtlehvkSHLQkYRl 55
                    prlrWtp+LH +Fv+av++LGG+++  AtPk +l+lm+vkgL+++hvkSHLQ+YR+
  XP_010920992.1 33 PRLRWTPDLHLCFVRAVQRLGGQDRagATPKLVLQLMNVKGLSIAHVKSHLQMYRS 88
                    9***********************9445***************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512949.4212991IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.3E-282989IPR009057Homeodomain-like
SuperFamilySSF466894.84E-143089IPR009057Homeodomain-like
TIGRFAMsTIGR015571.1E-213290IPR006447Myb domain, plants
PfamPF002494.2E-93487IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MRNGRSSSNS TTEESKKKGN SSSVRQYIRS TNPRLRWTPD LHLCFVRAVQ RLGGQDRAGA  60
TPKLVLQLMN VKGLSIAHVK SHLQMYRSKK MDESDRDGSR NMTDGRERHA YIFHHLPALR  120
GFDQRPQTYS SHGYWSTMGL GSHSSAAEMI FKGHHRMMGI RDIHMGSLTP NDRASCELHG  180
EFKDFHPLYD HKIGRSQFRP RGILEPSSQS QWHERGIEQA GQLSSTCTQE IDQQRPPSSL  240
RLGGQFTVRW RDDDHEPDLN LSLNITPRHE KRKRYWEDEE VDSSLSLALA SPFSKQEGCS  300
RDVEKASKLI SLKEKDGSGE QARRTSTLDL TI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A7e-153490357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B7e-153490357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C7e-153490357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D7e-153490357Protein PHOSPHATE STARVATION RESPONSE 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010920992.20.0uncharacterized protein LOC105044705 isoform X1
TrEMBLA0A2H3Y6S50.0A0A2H3Y6S5_PHODC; uncharacterized protein LOC103710387
STRINGXP_008794301.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44083671
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40260.14e-37G2-like family protein