PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010920993.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family G2-like
Protein Properties Length: 330aa    MW: 37751.2 Da    PI: 9.9459
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010920993.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.52.6e-323386255
         G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                    prlrWtp+LH +Fv+av++LGG+++AtPk +l+lm+vkgL+++hvkSHLQ+YR+
  XP_010920993.1 33 PRLRWTPDLHLCFVRAVQRLGGQDRATPKLVLQLMNVKGLSIAHVKSHLQMYRS 86
                    9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.9822989IPR017930Myb domain
Gene3DG3DSA:1.10.10.604.0E-302987IPR009057Homeodomain-like
SuperFamilySSF466891.79E-153087IPR009057Homeodomain-like
TIGRFAMsTIGR015576.3E-243288IPR006447Myb domain, plants
PfamPF002492.7E-93485IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    Send to blast
MRNGRSSSNS TTEESKKKGN SSSVRQYIRS TNPRLRWTPD LHLCFVRAVQ RLGGQDRATP  60
KLVLQLMNVK GLSIAHVKSH LQMYRSKKMD ESDRDGSRNM TDGRERHAYI FHHLPALRGF  120
DQRPQTYSSH GYWSTMGLGS HSSAAEMIFK GHHRMMGIRD IHMGSLTPND RASCELHGEF  180
KDFHPLYDHK IGRSQFRPRG ILEPSSQSQW HERGIEQAGQ LSSTCTQEID QQRPPSSLRL  240
GGQFTVRWRD DDHEPDLNLS LNITPRHEKR KRYWEDEEVD SSLSLALASP FSKQEGCSRD  300
VEKASKLISL KEKDGSGEQA RRTSTLDLTI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A1e-163488357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B1e-163488357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C1e-163488357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D1e-163488357Protein PHOSPHATE STARVATION RESPONSE 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010920993.20.0uncharacterized protein LOC105044705 isoform X2
TrEMBLA0A2H3Y6S50.0A0A2H3Y6S5_PHODC; uncharacterized protein LOC103710387
STRINGXP_008794301.10.0(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40260.15e-39G2-like family protein