PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010921035.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 259aa    MW: 28510.4 Da    PI: 4.1659
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010921035.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.96.8e-201262155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    ++y+GVr++  +g+WvAeIr+p   + r  r +lg+f ta eAa a+++a+++++g
  XP_010921035.1 12 CKYRGVRQRT-WGKWVAEIREP---N-RgSRLWLGTFPTALEAALAYDEAARAMYG 62
                    79*****999.**********8...3.35************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.05E-311270No hitNo description
PfamPF008473.2E-141262IPR001471AP2/ERF domain
SuperFamilySSF541715.69E-211370IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.5E-311371IPR001471AP2/ERF domain
PROSITE profilePS5103221.681370IPR001471AP2/ERF domain
SMARTSM003803.8E-351376IPR001471AP2/ERF domain
PRINTSPR003677.7E-101425IPR001471AP2/ERF domain
PRINTSPR003677.7E-103652IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009737Biological Processresponse to abscisic acid
GO:0010286Biological Processheat acclimation
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MKGKGGPDNP QCKYRGVRQR TWGKWVAEIR EPNRGSRLWL GTFPTALEAA LAYDEAARAM  60
YGPYARLNLP QFDDDASAHV TTSGSCESTA TSHDSDVSDV WNPRAPEVKV PKKEPEEIRN  120
DSLLPAPVGA ATNMKEEPGE ELFGPLDQLE DLPEDMFNVG DMLRMMDADP TNKGVGGEGM  180
DDSTGHSDAV ADTSWQLSSP SVFSFQLQNP DAKLLGSLHH MDQSPSDMGY GYDDFVKQLE  240
QDWGYGLPDD MGMWESGLF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A5e-161470663ATERF1
3gcc_A5e-161470663ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00302DAPTransfer from AT2G40340Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010921034.10.0dehydration-responsive element-binding protein 2B isoform X1
RefseqXP_010921035.10.0dehydration-responsive element-binding protein 2B isoform X2
TrEMBLA0A2H3YUP11e-146A0A2H3YUP1_PHODC; dehydration-responsive element-binding protein 2B-like isoform X3
STRINGXP_008804144.11e-142(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.15e-29ERF family protein