PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010921156.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 291aa    MW: 31881.5 Da    PI: 5.9711
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010921156.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY88.46.2e-28109170159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqKe+++s+fpr+Y+rCt++   gC++ ++v+rs+ d+++++itY g+H+++
  XP_010921156.1 109 LDDGYTWRKYGQKEIQSSKFPRAYFRCTHKfdqGCNAIRQVQRSEVDESMFIITYMGDHTCR 170
                     59***************************9999**************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.1E-27102172IPR003657WRKY domain
PROSITE profilePS5081123.089104172IPR003657WRKY domain
SuperFamilySSF1182907.32E-25106172IPR003657WRKY domain
SMARTSM007742.9E-36109171IPR003657WRKY domain
PfamPF031064.6E-25110170IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009862Biological Processsystemic acquired resistance, salicylic acid mediated signaling pathway
GO:0009864Biological Processinduced systemic resistance, jasmonic acid mediated signaling pathway
GO:0010200Biological Processresponse to chitin
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:1900056Biological Processnegative regulation of leaf senescence
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MTSPSQGNPL TQAAIGQLIK GQEAAARLEV LLQETTLGNS AIEAFKEVWD SFSRSISLLD  60
SGKPLETGQD PAITGVSKKR KTSPGEVKRG ASRRRSQPTS LRMVLSKTLD DGYTWRKYGQ  120
KEIQSSKFPR AYFRCTHKFD QGCNAIRQVQ RSEVDESMFI ITYMGDHTCR DPSMLPQIIS  180
PPSLKGSCLI SFGSSPTDNR QEAPLPSSSP SYVPERHEDV LSNLSPGTSS SEYVARAAAY  240
NEGSKLMTPL GSTSDHGDVD SGFHSSTSSL DMDFVTDSFE DIFSFDHDGF L
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A4e-27104170369OsWRKY45
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00408DAPTransfer from AT3G56400Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019706049.10.0probable WRKY transcription factor 70
TrEMBLA0A2H3XEL51e-144A0A2H3XEL5_PHODC; probable WRKY transcription factor 70
STRINGXP_008782668.11e-145(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP76563549
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-34WRKY DNA-binding protein 70