PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010921553.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 210aa    MW: 23219.2 Da    PI: 6.3393
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010921553.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY79.34.1e-252080259
                    --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
                    +Dg+ W+KYGqK++ g+++prsY++C+++   gC++ k+v+r ++dp ++ +tY g+H+++
  XP_010921553.1 20 EDGHIWKKYGQKKILGAKYPRSYFKCAQKkyqGCQAIKHVQRMQDDPPMFLVTYIGQHTCS 80
                    8**************************988889**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.6E-251281IPR003657WRKY domain
SuperFamilySSF1182907.85E-241480IPR003657WRKY domain
PROSITE profilePS5081121.231477IPR003657WRKY domain
SMARTSM007746.7E-351981IPR003657WRKY domain
PfamPF031061.5E-242079IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MAMVGGYSGA QKVISATELE DGHIWKKYGQ KKILGAKYPR SYFKCAQKKY QGCQAIKHVQ  60
RMQDDPPMFL VTYIGQHTCS NVLQTSQWIP DDSPSSDKCM LSFELDQSSI HQVNYWSSPE  120
VLSKHPAFWE PSQATSSKKS TMETSYDAPS VPAAADLPEC SPFPMDRSGC SNVVPGMFSQ  180
PSPQATDVDS FMSLLESFAG LCSDKDVGYK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A3e-181979868OsWRKY45
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010921553.11e-156probable WRKY transcription factor 38
TrEMBLA0A2H3XF381e-125A0A2H3XF38_PHODC; probable WRKY transcription factor 70
STRINGXP_008782779.11e-126(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP5079622
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.14e-25WRKY DNA-binding protein 70