PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010921624.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 248aa    MW: 27671.4 Da    PI: 8.1923
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010921624.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.96.2e-1961109355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     y+G+r+++ +g+W+AeIrdp     +  r++lg+f taeeAa+a+++ +++++g
  XP_010921624.1  61 YRGIRQRP-WGKWAAEIRDPM----KgVRVWLGTFNTAEEAARAYDREARRIRG 109
                     9*******.**********84....35************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.35E-2260118IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.4E-3260118IPR001471AP2/ERF domain
SMARTSM003802.5E-3860123IPR001471AP2/ERF domain
PROSITE profilePS5103223.51260117IPR001471AP2/ERF domain
CDDcd000181.38E-3261118No hitNo description
PRINTSPR003675.7E-126172IPR001471AP2/ERF domain
PfamPF008471.1E-1161109IPR001471AP2/ERF domain
PRINTSPR003675.7E-128399IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0034059Biological Processresponse to anoxia
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    Send to blast
MCGGAIISEF IPPRKSSGSN RRISTSDFWP DAATSFFPKT PEPVSAPPEK PKRKRERKNL  60
YRGIRQRPWG KWAAEIRDPM KGVRVWLGTF NTAEEAARAY DREARRIRGK KAKVNFPNED  120
PLPEPLKPQA HPSEHYPRGP IPSFPPYVHQ GRPFADPKVE TAEPFPAVAN GGDADGEVKR  180
LSEELMAYET YMNFFDIPYM EGGAVAQPEE AVALPEAGTN ACNQQAPVPS SMGMLWNFDD  240
LMPTSMAL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A9e-2261117663ATERF1
3gcc_A9e-2261117663ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010921624.10.0ethylene-responsive transcription factor ERF071
TrEMBLA0A2H3XJL21e-135A0A2H3XJL2_PHODC; LOW QUALITY PROTEIN: ethylene-responsive transcription factor ERF071-like
STRINGXP_008784773.11e-130(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP115472540
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47520.15e-31ERF family protein