PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010922460.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WOX
Protein Properties Length: 191aa    MW: 21740.7 Da    PI: 7.8818
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010922460.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox66.14.6e-21666257
                    T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    ++R+++t+eql +Lee++++  r+p+a+++++++++l    +++ ++V++WFqN++a++++
  XP_010922460.1  6 STRWCPTPEQLMILEEMYRSgVRTPNAAQIQQITAHLsyygKIEGKNVFYWFQNHKARDRQ 66
                    58*****************99*************************************996 PP
2Wus_type_Homeobox123.39.4e-40567264
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                       ++tRW+PtpeQ++iLee+y+sG+rtPn+++iq+ita+L+ yGkie+kNVfyWFQN+kaR+rqk
     XP_010922460.1  5 PSTRWCPTPEQLMILEEMYRSGVRTPNAAQIQQITAHLSYYGKIEGKNVFYWFQNHKARDRQK 67
                       689***********************************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007110.252267IPR001356Homeobox domain
SMARTSM003892.3E-6471IPR001356Homeobox domain
CDDcd000862.74E-5567No hitNo description
PfamPF000461.0E-18666IPR001356Homeobox domain
SuperFamilySSF466897.27E-12766IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.606.3E-8866IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MPQTPSTRWC PTPEQLMILE EMYRSGVRTP NAAQIQQITA HLSYYGKIEG KNVFYWFQNH  60
KARDRQKLRR RLSRHQQLHL QLHQSEDAPP PSPTLQHHMP LQFLHQGCFQ EATTQGMDLV  120
GKLETVGTEE EEPMTSAMGF EHEWMATKSI GSPVPPCCRP LKTLDLFPVK STSLKDECSS  180
SKSSSCSTST N
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010922460.11e-142WUSCHEL-related homeobox 3B-like
TrEMBLA0A2H3XGZ51e-112A0A2H3XGZ5_PHODC; WUSCHEL-related homeobox 3B-like
STRINGXP_008783634.11e-113(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21773897
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28610.13e-37WOX family protein