PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010922757.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 323aa    MW: 36260.1 Da    PI: 5.2383
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010922757.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY82.93.1e-26134195159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     +dDgy+WrKYGqK++ +s++prsY+rCt++   +C+++++v+rs++d ++ +itY geH+++
  XP_010922757.1 134 MDDGYTWRKYGQKDIFSSKHPRSYFRCTHKydqNCQATRQVQRSEDDFSTYVITYMGEHTCS 195
                     59***************************9999***************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.7E-26127197IPR003657WRKY domain
SuperFamilySSF1182904.18E-25129197IPR003657WRKY domain
PROSITE profilePS5081122.205129197IPR003657WRKY domain
SMARTSM007742.9E-36134196IPR003657WRKY domain
PfamPF031062.6E-24135194IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    Send to blast
MVGRGKSVSI GSLEQENSSL MDPKTATRVL IKGKESAIKL QSLLQESSPS EDHGKNSMIG  60
FFIEEILGSF DGALATLDSV GAPETHLDQA STPCSDEQGR DDSSKKRKVA SVRRNGYRRR  120
AHPYSCRRVS SKTMDDGYTW RKYGQKDIFS SKHPRSYFRC THKYDQNCQA TRQVQRSEDD  180
FSTYVITYMG EHTCSDPTKP PHLHPPSHQR PTFIISFGSE TAADTQQEPL SNSLHSSILK  240
QESDEEVLSD PSPGSSASEF FMLPDLDIFE QSAPMAQYMQ TALDRCDVMS DVHSPNSCLD  300
MEFGIHFDVD DVFSLDQDRL FQD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A1e-25129194368OsWRKY45
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010922757.20.0WRKY DNA-binding transcription factor 70
TrEMBLA0A2H3XTL01e-180A0A2H3XTL0_PHODC; probable WRKY transcription factor 70
STRINGXP_008788525.11e-180(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP76563549
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-28WRKY DNA-binding protein 70