PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010922889.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family G2-like
Protein Properties Length: 413aa    MW: 45427.1 Da    PI: 7.3111
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010922889.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like106.12e-334094155
         G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                    kprl+WtpeLH+rF+eav+qLGG+++AtPkt+++lm+++gLtl+h+kSHLQkYRl
  XP_010922889.1 40 KPRLKWTPELHQRFIEAVNQLGGADRATPKTVMRLMSIPGLTLYHLKSHLQKYRL 94
                    79****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.6013797IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.4E-313895IPR009057Homeodomain-like
SuperFamilySSF466894.84E-173995IPR009057Homeodomain-like
TIGRFAMsTIGR015574.3E-234095IPR006447Myb domain, plants
PfamPF002494.0E-94293IPR001005SANT/Myb domain
PfamPF143791.1E-24141188IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    Send to blast
MYRQHQGQND LFSSRAAFPP VLQAGNAPGS SGLFLSTDAK PRLKWTPELH QRFIEAVNQL  60
GGADRATPKT VMRLMSIPGL TLYHLKSHLQ KYRLSKNFQA QACSGTTKKV IGSVIAADRT  120
SEVSGPLISN TNIASHSYKT MQISEALQMQ IEVQRQLHEQ LEVQRHLQLR IEAQGKYLQS  180
VLEKAQETLG KQSVGSIGLD AAKVQLSELV NEVSNECIGT AFPSLRESSS LHTLKGQAAQ  240
FADYLGDSCL TSYKDLQKDR QTHHVSVGLR TYPGNSPLHT QQIGEDSTLA QTCFAWCGNV  300
NESRTLPSSR VKESEMTIFP VKESNILPKS VKPEGENIGS ISLSEAKQNE GDGEDPCLEM  360
PNGRRSAVQQ ESTNQLNGFA LPCLTVQLDL NARDDNDRSL GSKLFDLNGF SWS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A7e-223996158Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B7e-223996158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A7e-224096157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B7e-224096157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C7e-224096157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D7e-224096157Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A7e-223996158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C7e-223996158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D7e-223996158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F7e-223996158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H7e-223996158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J7e-223996158Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010922889.10.0myb-related protein 2
RefseqXP_010922890.10.0myb-related protein 2
TrEMBLA0A2H3ZQZ20.0A0A2H3ZQZ2_PHODC; myb-related protein 2-like
STRINGXP_008792509.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP35743879
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04030.31e-106G2-like family protein