PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010924726.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 277aa    MW: 29428.5 Da    PI: 5.3822
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010924726.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.38.9e-3079137259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+++++tY+ +Hnh+
  XP_010924726.1  79 TDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRVDPTMLVVTYSFDHNHP 137
                     69*************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081131.76673139IPR003657WRKY domain
Gene3DG3DSA:2.20.25.807.3E-3176139IPR003657WRKY domain
SuperFamilySSF1182901.83E-2577139IPR003657WRKY domain
SMARTSM007741.6E-3578138IPR003657WRKY domain
PfamPF031066.0E-2680137IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    Send to blast
MDGRCSTEPR NSEPEEVGIA PENNSPSPPG DTKAVQPLPS SQKRSSRRSV QKRVVSVPIS  60
GDGGSRPKGG AGGEGAPPTD SWAWRKYGQK PIKGSPYPRG YYRCSSSKGC PARKQVERSR  120
VDPTMLVVTY SFDHNHPWPL PKNHHQHPKP PPPAAAPPVD DPSPIHSSPP ESADLDQNFS  180
DLIGGEPSLM IHDEFRWFSD VGSPSSASPP AAAENLLYGS IFAGGALGLP DDCGGEEIGD  240
GEEDGMFAGL GELPECAVVF RREEARLAPA SWCGSTG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B7e-2052139679Disease resistance protein RRS1
5w3x_D7e-2052139679Disease resistance protein RRS1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010924726.10.0probable WRKY transcription factor 65 isoform X1
TrEMBLA0A2H3Y2811e-163A0A2H3Y281_PHODC; probable WRKY transcription factor 65 isoform X1
STRINGXP_008792327.11e-164(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP109473341
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.12e-40WRKY DNA-binding protein 65