PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010924816.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 281aa    MW: 29946.2 Da    PI: 4.4567
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010924816.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.5e-1979129155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +g+++AeIrd +     r  r++lg++ taeeAa  ++ a+ +l+g
  XP_010924816.1  79 TKFRGVRRRP-WGKYAAEIRDpW-----RgVRVWLGTYNTAEEAALVYDSAAIQLRG 129
                     69********.**********88.....55*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.3E-1279129IPR001471AP2/ERF domain
CDDcd000183.23E-2779136No hitNo description
Gene3DG3DSA:3.30.730.106.5E-2880137IPR001471AP2/ERF domain
SMARTSM003805.1E-3280143IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-2180137IPR016177DNA-binding domain
PROSITE profilePS5103221.74680137IPR001471AP2/ERF domain
PRINTSPR003672.0E-98192IPR001471AP2/ERF domain
PRINTSPR003672.0E-9103119IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MTKPRTLRVF WNDPDATDSS GDDECCSSGR RIGRLVREIA VDPCSATGAG VDEGVALPCR  60
TRPVRCGARR KAAAAVGDTK FRGVRRRPWG KYAAEIRDPW RGVRVWLGTY NTAEEAALVY  120
DSAAIQLRGP GATTNFCPST FTGAASAAQT SPEAKPASVS GVYESGDESR GVSSPTSVLR  180
GLSSASSSSE EKGGVKTGPA RLPENMEDFS ALEDEALYGA FLDLGAPEPR ILEDAAGIGF  240
LTDEMNEGVL QSGWDFGSTP WPGDDCFHEI DDLFPLDPFL I
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-18801361471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010924816.10.0ethylene-responsive transcription factor CRF2
TrEMBLA0A2H3Y0Q81e-151A0A2H3Y0Q8_PHODC; ethylene-responsive transcription factor ERF069-like
STRINGXP_008791463.11e-152(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP16903697
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.11e-34cytokinin response factor 4