PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010925093.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family Trihelix
Protein Properties Length: 404aa    MW: 45993.4 Da    PI: 4.2786
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010925093.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix48.91.7e-15143227286
        trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     W+++ + +L++a  ++  + +r++l+   W ev+kk+ ++   +rs  qC+++++ l+k+ykk+k ++ +++s +ss+++yf++++
  XP_010925093.1 143 WSEDATFVLLDAWGDRYVQNGRKSLRSDEWTEVAKKVsQSSRTTRSDAQCRNRLDTLKKKYKKEKVRMAEHAS-ASSKWVYFKKMD 227
                     *************************************666778***************************955.5569*******8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138373.2E-21142229No hitNo description
Gene3DG3DSA:1.10.10.607.0E-4168213IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    Send to blast
MDDSQDDARY PPNHPYPSIR RRPFSSSSSS HQSKISAPQN SSFPRPIGRR YADEDDEDEQ  60
NDIDEAGDED DEEEEDQDDG GRYRQIRDDD DDDDDDEDSS ESRGKRRRLD RFALGFEFAP  120
RVPRPAAAPP AGKIPAKSSP ADWSEDATFV LLDAWGDRYV QNGRKSLRSD EWTEVAKKVS  180
QSSRTTRSDA QCRNRLDTLK KKYKKEKVRM AEHASASSKW VYFKKMDELM SSPSPPAAGA  240
RQQQPPRLPC GVDAGEYVFA SSSVYLDRSN GNDEMRDSPG DTGSEDAVDE EDDDESDGLP  300
PTREKVSVRS SDSSFRMLAD SIQKFGEIYE KMENSKRQQM AELERMRKEF QRDLEVHKRQ  360
ILERAQAEIA KIREEEGEDE EEERSEDDED GDDEIDVSAE NLSG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1104108KRRRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010925093.10.0trihelix transcription factor ASIL2
TrEMBLA0A2H3Z6F40.0A0A2H3Z6F4_PHODC; trihelix transcription factor ASIL2
STRINGXP_008808856.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP80902224
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24490.12e-61Trihelix family protein