PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010925600.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 287aa    MW: 30591.2 Da    PI: 7.3374
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010925600.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.61.7e-3060118259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s  gCp++k+vers+ +p++++itY geHnh+
  XP_010925600.1  60 SDSWAWRKYGQKPIKGSPYPRGYYRCSSCkGCPARKQVERSRLNPTMLVITYAGEHNHP 118
                     69************************9988****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.9E-3154120IPR003657WRKY domain
SuperFamilySSF1182902.75E-2657120IPR003657WRKY domain
SMARTSM007742.2E-3659119IPR003657WRKY domain
PROSITE profilePS5081131.52560120IPR003657WRKY domain
PfamPF031061.3E-2561118IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    Send to blast
MDGRAKGSDP EDPGIVPKSD GVSLPSTTRL SSPSSKKRSR RSVLKRVVSV PSGDGAVPPS  60
DSWAWRKYGQ KPIKGSPYPR GYYRCSSCKG CPARKQVERS RLNPTMLVIT YAGEHNHPCP  120
LPRNRHHQYH RSSKLRSAET PTSDLEPAPP DSGPTGPTKP DAKFADLIAD DTSSLITLDK  180
LYLLPDAAST SSTSPAEADD ALLYGPVCSA AGDGAALGVS MMLTDECERL SGDDGGCGGE  240
EDSLFADLGE LPECSAVLRR GVVERHMRGE ESQRCTLTTV ACCRSSG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B2e-2242120379Disease resistance protein RRS1
5w3x_D2e-2242120379Disease resistance protein RRS1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010925600.10.0probable WRKY transcription factor 65
TrEMBLA0A2H3YRF81e-137A0A2H3YRF8_PHODC; probable WRKY transcription factor 65
STRINGXP_008802713.11e-138(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP70883651
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.13e-41WRKY DNA-binding protein 65