PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010925682.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 290aa    MW: 31633.1 Da    PI: 5.8659
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010925682.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.21.3e-11171216550
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                     kr +r   NR +A+rsR RK+++i eLe+ v +L++e +aL  ++ 
  XP_010925682.1 171 KRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPQVA 216
                     899**********************************999986665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.0E-14167231IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.818169225IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.15E-12171225No hitNo description
PfamPF001704.0E-10171217IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.7E-15171225No hitNo description
CDDcd147036.24E-25172222No hitNo description
PROSITE patternPS000360174189IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    Send to blast
MAQLPPKIPN LSTNWPNFGY QKSPSMGTIF VPAAAPSHAA QPSWVDEFLD FSTAKRGAHR  60
RSASDSVTFL EPPADGSIDD GRAHEFDRLD DDQLLSMFSD DVPPFSVAVA PVSSSSRSTP  120
SDHNSSEEKT GEPQGQRNEA EEAQSTCKAE PQAAPAAAPQ ASGPEPIADP KRVKRILANR  180
QSAQRSRVRK LQYISELERS VTTLQTEVSA LSPQVAFLDH QRSVLTVGNS HLKQRIAALA  240
QDNIFKDAHQ EALKKELERL RQVYHQQSLQ QMGAPTSDPA VPADNELLAP
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010925682.10.0basic leucine zipper 61
SwissprotQ9M2K41e-105BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A2H3XHL11e-151A0A2H3XHL1_PHODC; basic leucine zipper 61
STRINGXP_008783934.11e-152(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP132238125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42380.25e-84bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]