PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010925763.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 369aa    MW: 41272.9 Da    PI: 6.7915
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010925763.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY87.61e-27135194258
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                     dDg++WrKYGqK++ g+++pr+YYrCt++   gCp+kk v+rs+ dp v++itY g+H +
  XP_010925763.1 135 DDGFSWRKYGQKDILGAKYPRGYYRCTHRnaqGCPAKKLVQRSDADPAVFDITYWGRHIC 194
                     8***************************98899*************************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081123.307129192IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.8E-26129194IPR003657WRKY domain
SuperFamilySSF1182902.88E-24133194IPR003657WRKY domain
SMARTSM007741.1E-38134196IPR003657WRKY domain
PfamPF031062.5E-25135194IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    Send to blast
MEKGTSWDIS LLLEVLTQGE EQNRQLQAQL DDPSSAELSK SLAQQIQFTF NKAITMAKLI  60
AADNSRQPPC PNNTSPGSPR SASRSPRSEN SEKAFKEHEK KGMSKKRCML DRKSLPKWTS  120
QVRISSGATA EGQIDDGFSW RKYGQKDILG AKYPRGYYRC THRNAQGCPA KKLVQRSDAD  180
PAVFDITYWG RHICLQRPRV NSASSAPEAG MQRDQQNPPL DHDQQHPRHD RQLLLSFRAG  240
LKVKTEGLDM EDQNLTSSSF SFPSTPIGSL KHEDQIFSSP PTLENNFMGS FSPNFFSPTT  300
SESSYFSVPS EMDNYGGRAA LHTSESDLTG TISAAASVTN FPMVDIDFML EPHMDFEPNF  360
PFDDSNLFR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-18134194868OsWRKY45
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010925763.10.0probable WRKY transcription factor 41 isoform X1
TrEMBLA0A2H3XZP80.0A0A2H3XZP8_PHODC; probable WRKY transcription factor 41
STRINGXP_008783826.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP133402730
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.16e-40WRKY family protein