PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010925765.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 364aa    MW: 40654.2 Da    PI: 6.7951
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010925765.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY87.71e-27130189258
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                     dDg++WrKYGqK++ g+++pr+YYrCt++   gCp+kk v+rs+ dp v++itY g+H +
  XP_010925765.1 130 DDGFSWRKYGQKDILGAKYPRGYYRCTHRnaqGCPAKKLVQRSDADPAVFDITYWGRHIC 189
                     8***************************98899*************************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.8E-26124189IPR003657WRKY domain
PROSITE profilePS5081123.307124187IPR003657WRKY domain
SuperFamilySSF1182902.88E-24128189IPR003657WRKY domain
SMARTSM007741.1E-38129191IPR003657WRKY domain
PfamPF031062.5E-25130189IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    Send to blast
MEKGTSWDIS LLLEVLTQGE EQNRQLQAQL DDPSSAELSK SLAQQIQFTF NKAITMAKLI  60
AADNSRQPPC PNNTSPGSPR SASRSPRSEN SEKAFKEHEK KGMSKKRKSL PKWTSQVRIS  120
SGATAEGQID DGFSWRKYGQ KDILGAKYPR GYYRCTHRNA QGCPAKKLVQ RSDADPAVFD  180
ITYWGRHICL QRPRVNSASS APEAGMQRDQ QNPPLDHDQQ HPRHDRQLLL SFRAGLKVKT  240
EGLDMEDQNL TSSSFSFPST PIGSLKHEDQ IFSSPPTLEN NFMGSFSPNF FSPTTSESSY  300
FSVPSEMDNY GGRAALHTSE SDLTGTISAA ASVTNFPMVD IDFMLEPHMD FEPNFPFDDS  360
NLFR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-18129189868OsWRKY45
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010925765.10.0probable WRKY transcription factor 41 isoform X2
TrEMBLA0A2H3XZP80.0A0A2H3XZP8_PHODC; probable WRKY transcription factor 41
STRINGXP_008783826.10.0(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.12e-41WRKY family protein