PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010925783.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 343aa    MW: 37776.9 Da    PI: 4.7999
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010925783.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.92.9e-19119169155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +g+++AeIrd +     r  r++lg++ taeeAak ++ a+ +l+g
  XP_010925783.1 119 PRFRGVRRRP-WGKYAAEIRDpW-----RrVRVWLGTYNTAEEAAKVYDSAAIQLRG 169
                     689*******.**********88.....55*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.0E-12119169IPR001471AP2/ERF domain
CDDcd000187.88E-29119176No hitNo description
SuperFamilySSF541711.11E-20120178IPR016177DNA-binding domain
PROSITE profilePS5103222.893120177IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.7E-28120177IPR001471AP2/ERF domain
SMARTSM003802.1E-33120183IPR001471AP2/ERF domain
PRINTSPR003671.9E-9121132IPR001471AP2/ERF domain
PRINTSPR003671.9E-9143159IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042991Biological Processtranscription factor import into nucleus
GO:0048366Biological Processleaf development
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MDMMYSLPVK RTEHVNVNPK PRPRSIYRSG KANKLAGRRM VRIFCDDYDA TDSSSDEEDC  60
CYFRRRVKRY VQEIRFEDRP AKTTAIAAGD KERSGKVGGK KKKPVLGTPG DKPGSPAAPR  120
FRGVRRRPWG KYAAEIRDPW RRVRVWLGTY NTAEEAAKVY DSAAIQLRGP DATTNFSTRS  180
VPTSAAAPAQ PSPPTKNLSD GTVSGGYDSG EESPNLSSPT SVLYGFPPSA ADKSEENKAQ  240
EEQQTPTEVS DEKASILPAS ISLPDEFGDF MSFDEVPFYN DLLGFDSSEP GFFADSAEIG  300
FFTSDISDVM LSSDLNLASV SWQGDDYFQD IGDLFPIDPL PTA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-171201761471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00456DAPTransfer from AT4G27950Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010925783.10.0ethylene-responsive transcription factor CRF2
TrEMBLA0A2H3XCE40.0A0A2H3XCE4_PHODC; ethylene-responsive transcription factor CRF1
STRINGXP_008781621.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP16903697
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.13e-43cytokinin response factor 4