PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010925829.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 371aa    MW: 39355.6 Da    PI: 4.7365
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010925829.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.44.4e-31156214259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+vers++dp +++itY+ eHnh+
  XP_010925829.1 156 SDMWAWRKYGQKPIKGSPYPRGYYRCSSSkGCLARKQVERSRTDPAMFVITYTAEHNHP 214
                     79*************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.5E-31141216IPR003657WRKY domain
PROSITE profilePS5081134.084150216IPR003657WRKY domain
SuperFamilySSF1182903.92E-26153216IPR003657WRKY domain
SMARTSM007741.9E-37155215IPR003657WRKY domain
PfamPF031061.2E-25157214IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010150Biological Processleaf senescence
GO:0010200Biological Processresponse to chitin
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    Send to blast
MDDDNWDLHA VVRSCRFMGS ASTMDPFSSF PPPSDLLAEE TGLMDGGEGG GGSGGLPLCF  60
PDMFESRSVL QELEELCKPF LPKAQQQPQR SGPSSPPSSA VLSVTGAASL VPAVGATQQQ  120
QSRQPHRPPS QISRSKRRKN QQKRVVCQVP ADGLSSDMWA WRKYGQKPIK GSPYPRGYYR  180
CSSSKGCLAR KQVERSRTDP AMFVITYTAE HNHPLPTHRN SLAGSTRQKF PPPPSSSTTP  240
PPAAGDGEHL PPVNPSSSPP SSSTAAGLSP TTPLTASKRE DGGDVDDEEE EEVEGMLLVE  300
DMEVMGEDGL LFMGLDEPSS APIASAAAST AATDAVAPTF FDDDGVFGEH FFPPPWLSNS  360
NNNAAAAAGG S
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B3e-21146217880Disease resistance protein RRS1
5w3x_D3e-21146217880Disease resistance protein RRS1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00422DAPTransfer from AT4G01250Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010925829.10.0probable WRKY transcription factor 27
TrEMBLA0A3Q0I2D80.0A0A3Q0I2D8_PHODC; WRKY transcription factor 22-like
STRINGXP_008797253.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP53583361
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.12e-47WRKY family protein