PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010926099.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ARR-B
Protein Properties Length: 736aa    MW: 79513.5 Da    PI: 6.6275
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010926099.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like86.82.1e-27220273155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     kpr++W+ eLH++Fv+av qL G++kA+Pk+il+lm+v+gLt+e+v+SHLQk+Rl
  XP_010926099.1 220 KPRVVWSVELHQQFVNAVYQL-GINKAVPKRILDLMNVPGLTRENVASHLQKFRL 273
                     79*******************.********************************8 PP
2Response_reg761.4e-25391471109
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     vl+vdD+ + +++l+++l + +y +v+++  + +al +l+e++  +D+++ D+ mp++dGl+ll+ i  e  +lp+i+++a +  + + + ++ G
  XP_010926099.1  39 VLVVDDDTICLRILERMLLECRY-NVTTCNMAASALSILRESKggFDVVISDVHMPDVDGLQLLELIGLEM-DLPVIMMSADKRTSIVMQGIRHG 131
                     89*********************.******************99***********************6644.8********************** PP

                     ESEEEESS--HHHHHH CS
    Response_reg  94 akdflsKpfdpeelvk 109
                     a d+l Kp+ +eel +
  XP_010926099.1 132 ACDYLIKPVRIEELKN 147
                     *************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521722.28E-3436162IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23005.0E-4136177No hitNo description
SMARTSM004481.2E-2737149IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011041.14938153IPR001789Signal transduction response regulator, receiver domain
PfamPF000722.7E-2239147IPR001789Signal transduction response regulator, receiver domain
CDDcd001562.98E-2540152No hitNo description
PROSITE profilePS5129410.615217276IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.4E-28217278IPR009057Homeodomain-like
SuperFamilySSF466891.36E-18218277IPR009057Homeodomain-like
TIGRFAMsTIGR015577.9E-24220273IPR006447Myb domain, plants
PfamPF002491.4E-5222271IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 736 aa     Download sequence    Send to blast
MAKVQQMPPS SVDTSSIYGG SSAKVREPIP KDFPVGMRVL VVDDDTICLR ILERMLLECR  60
YNVTTCNMAA SALSILRESK GGFDVVISDV HMPDVDGLQL LELIGLEMDL PVIMMSADKR  120
TSIVMQGIRH GACDYLIKPV RIEELKNIWQ HVVRKKWQDN REAEHSDSFE DSDRRATNDA  180
ENNSSGNDAT DNAIKSQKKR RDSKEDDEGE LDNSDSSSKK PRVVWSVELH QQFVNAVYQL  240
GINKAVPKRI LDLMNVPGLT RENVASHLQK FRLYLKRLSV DQHHTGLPNS LSGVGSNAKV  300
PFLGSLDFQP LTATGQIPPQ TLASWQEELL GRPFGSFAMP AMDQPLLQQA SMQGAKSVPV  360
EHGIAFGQPL MKCPATMPTE FSQSNVAVRG LSSGFPTWSS SKVISASNLG GLSNDSNLQV  420
PVLQQQQLHP VLSESHHAIN VQPSCLVLPS QASNNFQERE NPVLANQNSV VLPTQSSMSF  480
QSGNNPTPMN QNSIIVPARS STSMQADNNL GLTNQNSSLT SFQGGNNLGL INRNSITLPS  540
QPLTSFQAGS SPAPISHSSS LKKSSRIVDY NLLSSNSSNV QLGEAQVSDE VFKNFTVLNS  600
YSIPKSISSS VSSCTNVSMG WWAQTLGGNI GPVNQSCLMP SLSNIQGAGA MSQALPDQGQ  660
GKNLDLANLS NIRCGGTLSQ ILPDQGQGRS LGFIGKGTRI PSRFAVGDIE SPTNGSSLND  720
NGEILNRGHL GFNGDV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A2e-22216279164ARR10-B
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010926099.10.0two-component response regulator ORR21
TrEMBLA0A2H3WYF00.0A0A2H3WYF0_PHODC; LOW QUALITY PROTEIN: two-component response regulator ORR21
STRINGXP_008775607.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP57963754
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-117response regulator 2