PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010926496.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

G2-like

Protein Properties

Length: 231aa MW: 25782.1 Da PI: 5.6836

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010926496.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	84.3	1.3e-26	177	227	1	51
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 k+r++W+peLH rF+++++qLGGs+ AtPk+i+elmkv+gLt+++vkSHLQ XP_010926496.1 177 KARRCWSPELHCRFLHVLDQLGGSHAATPKQIRELMKVDGLTNDEVKSHLQ 227 68************************************************* PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	10.863	174	231	IPR017930	Myb domain
SuperFamily	SSF46689	1.79E-12	175	227	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	7.9E-22	176	227	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	2.8E-21	177	227	IPR006447	Myb domain, plants

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence Send to blast
MDFAERARRY QEYVEALEEE RRKIEVFQRE LPLCLQLVTQ AIEGIRIQIG SSEEMVTDGP 60 VLEEFIPLKP TSSSIEEEKG GLMEIEQERS EKKPDWLRSV QLWNQETDHS LPKGEPPKKP 120 IAVNAKKSSG AFHPFEREKH VPAVPAGAAA SSSTVGGGGG GGEKEKDKEG QSQPPRKARR 180 CWSPELHCRF LHVLDQLGGS HAATPKQIRE LMKVDGLTND EVKSHLQDDV A

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor involved in phosphate signaling in roots. {ECO:0000250\|UniProtKB:Q9FX67}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010926495.1	1e-166	transcription factor NIGT1
Swissprot	Q9FPE8	6e-72	HHO3_ARATH; Transcription factor HHO3
TrEMBL	A0A2H3XDY4	1e-128	A0A2H3XDY4_PHODC; transcription factor NIGT1
STRING	XP_008782297.1	1e-128	(Phoenix dactylifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	2e-69	G2-like family protein

Publications ? help Back to Top
Nagarajan VK,Satheesh V,Poling MD,Raghothama KG,Jain A Arabidopsis MYB-Related HHO2 Exerts a Regulatory Influence on a Subset of Root Traits and Genes Governing Phosphate Homeostasis. Plant Cell Physiol., 2016. 57(6): p. 1142-52 [PMID:27016098]