PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010927841.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 166aa    MW: 18418.6 Da    PI: 6.1112
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010927841.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.16.7e-161564255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    +ykGVr++k +g++v+eIr+p   g +  r +lg++ t+e Aa a++ a   l+g
  XP_010927841.1 15 KYKGVRRRK-WGKYVSEIRVP---G-ThERLWLGSYTTPEAAAVAHDTAVYFLRG 64
                    8*****998.**********8...3.35**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.1E-251475IPR001471AP2/ERF domain
SuperFamilySSF541714.12E-171575IPR016177DNA-binding domain
PfamPF008473.6E-81564IPR001471AP2/ERF domain
SMARTSM003804.0E-251580IPR001471AP2/ERF domain
PROSITE profilePS5103220.4951574IPR001471AP2/ERF domain
CDDcd000181.69E-221575No hitNo description
PRINTSPR003679.4E-81627IPR001471AP2/ERF domain
PRINTSPR003679.4E-83854IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    Send to blast
MRRSQEGAVA AGERKYKGVR RRKWGKYVSE IRVPGTHERL WLGSYTTPEA AAVAHDTAVY  60
FLRGPDCSET LNFPDRVAMY AWTGLSPRSI QRVASDSGMA IDAQLVVRDA VAGSQPPTQR  120
AEVGAIESVN SREGGDQHGL HEVMSTEFVG DICIDDMDLY MYNCYQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-14879777Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11622KGVRRRK
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00158DAPTransfer from AT1G22810Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010927841.11e-122ethylene-responsive transcription factor ERF020-like
SwissprotO805422e-35ERF19_ARATH; Ethylene-responsive transcription factor ERF019
TrEMBLA0A2H3X4U91e-86A0A2H3X4U9_PHODC; ethylene-responsive transcription factor ERF020-like
STRINGXP_008778360.12e-87(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP64332951
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22810.18e-38ERF family protein
Publications ? help Back to Top
  1. Scarpeci TE,Frea VS,Zanor MI,Valle EM
    Overexpression of AtERF019 delays plant growth and senescence, and improves drought tolerance in Arabidopsis.
    J. Exp. Bot., 2017. 68(3): p. 673-685
    [PMID:28204526]