PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010928195.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family C2H2
Protein Properties Length: 213aa    MW: 23484.2 Da    PI: 6.7887
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010928195.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.88.3e-0584106123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     y+C++C+k F+++  L  H  +H
  XP_010928195.1  84 YRCNICSKYFPTHQALGGHTASH 106
                     9**************99998887 PP
2zf-C2H211.10.0013144166123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C  +F++   L  H r+H
  XP_010928195.1 144 HRCTICQATFPTGQALGGHKRKH 166
                     79*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003550.04684106IPR015880Zinc finger, C2H2-like
SuperFamilySSF576673.62E-684106No hitNo description
PfamPF139122.6E-884108IPR007087Zinc finger, C2H2
PROSITE profilePS501579.9184111IPR007087Zinc finger, C2H2
PROSITE patternPS00028086106IPR007087Zinc finger, C2H2
SuperFamilySSF576673.62E-6139166No hitNo description
SMARTSM003550.051144166IPR015880Zinc finger, C2H2-like
PfamPF139121.6E-11144167IPR007087Zinc finger, C2H2
PROSITE patternPS000280146166IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    Send to blast
MSRSTNLWTG GLQYRKKTKE MDEKNIEGDA MHAENVDGLQ DECIDVGASS REENVQKKKK  60
KKKKIKDLES VHEARPPTQD SSGYRCNICS KYFPTHQALG GHTASHNKKN NSEEVDEAED  120
GNLGHAEELV DSNNLVPKPA TTEHRCTICQ ATFPTGQALG GHKRKHWNGP VTTSPSPPPA  180
PSPVPLAESV QKAKNMFMDI DLNELPKFEG GEP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15763KKKKKKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010928195.21e-158zinc finger protein ZAT3-like
TrEMBLA0A2H3ZSX32e-59A0A2H3ZSX3_PHODC; zinc finger protein ZAT9-like
STRINGXP_008796592.12e-49(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1943657
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19580.27e-19zinc-finger protein 2