PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010928615.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family Trihelix
Protein Properties Length: 313aa    MW: 34758.9 Da    PI: 9.1666
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010928615.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix51.92.1e-1634121186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergfe..rspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +W+++ vl+L+e++++++   +r+klk+ +We++++++  r  g++  +sp qCk+k+e+++kry+++   + +  ++s s+++++ +++
  XP_010928615.1  34 EWSESGVLCLLEVYESKWLLRNRAKLKGSDWEDIARQVsaRCSGMKglKSPSQCKNKIESMKKRYRAESSAAHE--PNSCSSWQFYARMD 121
                     5************************************988666664338*****************99888887..788889******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138375.3E-2032123No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MDSAQGGSNH LPAGPDHSLV PAATRVPDKG KRDEWSESGV LCLLEVYESK WLLRNRAKLK  60
GSDWEDIARQ VSARCSGMKG LKSPSQCKNK IESMKKRYRA ESSAAHEPNS CSSWQFYARM  120
DSLLKGTPNC AAQPKSNHNI NLQALPKMEN EVEVVGHLQD SNQDDASNTS PVDVKAVNND  180
NSDKKESRGD SDGSAPRSKA VNAEERTGRV GNPSKRRKES GNEMADSIRL LAESILKIEQ  240
AKIEMYKDSE RMRAEAEIKR GEMELKRTEI IAKTQLQIAK LFAKKSQGRS SKSEGSSLRT  300
ELDMLPRRDV TDD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010928615.10.0trihelix transcription factor ASIL1
TrEMBLA0A2H3XWH40.0A0A2H3XWH4_PHODC; trihelix transcription factor ASIL1-like
STRINGXP_008789713.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP73333346
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54390.12e-65sequence-specific DNA binding transcription factors