PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010928841.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 443aa    MW: 49491.2 Da    PI: 7.7333
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010928841.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.49.8e-11152187439
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39 
                      +  rr+++NReAAr+sR+RKka++++Le     L+
  XP_010928841.1 152 ARTLRRLAQNREAARKSRLRKKAYVQQLESSKIRLT 187
                     56789***********************97544444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.9E-9147195No hitNo description
SMARTSM003384.7E-7149214IPR004827Basic-leucine zipper domain
PfamPF077162.9E-8150198IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.209151195IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.06E-6153195No hitNo description
PROSITE patternPS000360156171IPR004827Basic-leucine zipper domain
PfamPF141442.5E-32243316IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 443 aa     Download sequence    Send to blast
MGDKGSSKEG QQQEHQSSFG MIHSSSSSST MHGNFIMGKD VAPYDFGELD QALFLYLDGQ  60
DHSSVQEQRQ TLNIFPSQPM HVVSTSKGEA SLMSPTSSSS KKSSEQSMEL PDPRSDLAAR  120
PEPQQNIKAV VKRERNGKGP SSEQEGPKTP DARTLRRLAQ NREAARKSRL RKKAYVQQLE  180
SSKIRLTQLE QELQRARVQG LLIGSGGVIG DQSLAGSTSG LKTDAAMFDM EYGRWLEDHH  240
RLMCELRAAV QEHLPENELR MLVDKCLGHY DAVVNLKSVM ARSDVFHLIS GIWMTPAERC  300
FMWIGGFRPS ELIKIVLKHI EPLTEQQILG VCSLQQSVHE TEEALSQGLE ALFRSLSDTV  360
VSDALSSPSN MGNYIGQMVV AMNKLSALEA FVRQADNLRQ QTVHRLHLIL STLQAARCFL  420
AMAEHFHRLR ALSSLWLTRP RQE
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010928841.10.0bZIP transcription factor TGA10 isoform X1
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A2H3YM290.0A0A2H3YM29_PHODC; bZIP transcription factor TGA10-like
STRINGXP_008800656.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP78763543
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-163bZIP family protein