PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010928933.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 242aa    MW: 25325.4 Da    PI: 9.3839
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010928933.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.41.1e-202776255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +++GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa+a++aa+++++g
  XP_010928933.1 27 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDAAAREFRG 76
                    69*******.**********8...557************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.5E-322784IPR001471AP2/ERF domain
SuperFamilySSF541711.96E-222785IPR016177DNA-binding domain
SMARTSM003802.3E-382790IPR001471AP2/ERF domain
PROSITE profilePS5103223.9332784IPR001471AP2/ERF domain
CDDcd000181.88E-182785No hitNo description
PfamPF008473.8E-142776IPR001471AP2/ERF domain
PRINTSPR003675.0E-112839IPR001471AP2/ERF domain
PRINTSPR003675.0E-115066IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    Send to blast
MAPREKAAGG RGVLSGGAAA GGGKEVHFRG VRKRPWGRYA AEIRDPGKKS RVWLGTFDTA  60
EEAARAYDAA AREFRGSKAK TNFPYPEAYQ SAGGGGDGRG GGAARSPSSQ SSTVESSSRE  120
AAVPPMAHPL PSSLDLDLHR GARFPFQPYP TAVPATGVAP SFFFLDAFVR SEKVAAAAAA  180
NHHHLTMGTP MFLADFQAPL AGGISSDSDS SVVDLLPHHP SPPLPKMLPF DLDLNLPPPE  240
VA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A8e-21986474Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010928933.11e-172ethylene-responsive transcription factor 9
TrEMBLA0A2H3XWK52e-92A0A2H3XWK5_PHODC; ethylene-responsive transcription factor 9-like
STRINGXP_008789749.13e-93(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38463174
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.12e-25erf domain protein 9