PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010929160.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 533aa    MW: 57262.1 Da    PI: 7.6303
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010929160.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY82.34.8e-26198253359
                     -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     D ynWrKYGqK+vk+se+ rsYY+C++ +C vkkkve+++ d++v+ei+Y+g Hnhe
  XP_010929160.1 198 DDYNWRKYGQKQVKNSENIRSYYKCAHGDCYVKKKVECCQ-DGRVTEIVYRGCHNHE 253
                     99*************************************9.***************8 PP
2WRKY103.41.3e-32368425259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dgy WrKYGqK vkg+++prsYYrCt+ gCpv+k+vers+ed k+++itYeg+Hnh+
  XP_010929160.1 368 SDGYGWRKYGQKFVKGNPNPRSYYRCTHIGCPVRKHVERSSEDAKYMVITYEGKHNHD 425
                     7********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.7E-24189255IPR003657WRKY domain
PROSITE profilePS5081119.015191255IPR003657WRKY domain
SuperFamilySSF1182902.48E-21194255IPR003657WRKY domain
SMARTSM007742.7E-26196254IPR003657WRKY domain
PfamPF031061.8E-19198253IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.0E-33352427IPR003657WRKY domain
SuperFamilySSF1182902.88E-28361427IPR003657WRKY domain
PROSITE profilePS5081134.199362427IPR003657WRKY domain
SMARTSM007748.7E-37367426IPR003657WRKY domain
PfamPF031061.2E-25369425IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 533 aa     Download sequence    Send to blast
MAEEVSSGAR EHDKADREGS PKTSSSPPLG AEGGDSKTLA PPDASSGPGG DGGGAGDPRS  60
FSQLLAGAMA SAAAVSSSAA LILPVPVLAV PCYIAPAAGL SGHFAVTHQA VLASVTAQAL  120
LQLQKSYPSS SDFLRNSVPQ PQLSNVTLVP LQQDPLPVAG NNACAPETEQ PPSSHQNQQS  180
NSIVVKTSFD DEKESSGDDY NWRKYGQKQV KNSENIRSYY KCAHGDCYVK KKVECCQDGR  240
VTEIVYRGCH NHEPPLKVRS SRVRKAKRGA SCVVNKNLDL PGAELKEAVP SPSKLQQTSG  300
NETLKEELPC SNDHEEDSGM KAQEDLGEKP DPKRRVSEST VLFSAPILKT IREPKIVLQT  360
ACGVGLTSDG YGWRKYGQKF VKGNPNPRSY YRCTHIGCPV RKHVERSSED AKYMVITYEG  420
KHNHDLPSLK DGSDPPATPL LTAVATAMSK CEQTQKNYPL SYEKPTTKLL PDVDGKIVNE  480
RAQELGGEKA IESAQTLLSM GLSSTSENVG RKNSEGIQQP QLNRNCTLPV QNS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A4e-27355427274WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010929160.10.0probable WRKY transcription factor 4
TrEMBLA0A2H3Y7J10.0A0A2H3Y7J1_PHODC; probable WRKY transcription factor 3
STRINGXP_008794350.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP58203455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13960.12e-68WRKY DNA-binding protein 4