PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010929454.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

bZIP

Protein Properties

Length: 123aa MW: 14168.7 Da PI: 7.0755

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010929454.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	41.1	4e-13	34	83	7	56
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 rr+++NRe+ArrsR RK+ + eL v L a N++L +el++ +e XP_010929454.1 34 RRRRISNRESARRSRMRKQRHLGELWSQVVHLRATNRRLVDELNHVVEER 83 69*****************************************9988776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.5E-11	30	92	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.5E-11	33	82	No hit	No description
Pfam	PF00170	4.6E-10	34	89	IPR004827	Basic-leucine zipper domain
CDD	cd14702	7.28E-14	34	84	No hit	No description
PROSITE profile	PS50217	9.749	34	86	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.1E-10	34	83	No hit	No description
PROSITE pattern	PS00036	0	35	50	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 123 aa Download sequence Send to blast
MGSGDGVHLP CSGPGNTLTS DEADEHQPGL VDERRRRISN RESARRSRMR KQRHLGELWS 60 QVVHLRATNR RLVDELNHVV EERDRILYEN AWLRQEASDL REKLNYMQVE STASSAPTAS 120 YET

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	44	51	RRSRMRKQ

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010929454.1	4e-86	basic leucine zipper 43-like
TrEMBL	A0A2H3YEF9	3e-47	A0A2H3YEF9_PHODC; bZIP transcription factor RISBZ5-like
STRING	XP_008783104.1	4e-61	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1186	35	126

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30530.1	2e-19	basic leucine-zipper 42