PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010929460.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

Dof

Protein Properties

Length: 353aa MW: 37711.1 Da PI: 7.0315

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010929460.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.4	1.8e-39	62	121	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++alkcprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+++ XP_010929460.1 62 QAALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVK 121 7789*****************************************************976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	6.0E-31	59	119	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.1E-33	63	119	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.525	65	119	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	67	103	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence Send to blast
MGEMLLIPGN NNSENNNTDT NNNKNASTAT SNSSTSTNSN MIHAAAAPSA ARVMDKPAQD 60 HQAALKCPRC DSSNTKFCYY NNYSLSQPRH FCKACKRYWT RGGTLRNVPV GGGCRKNKRV 120 KKPTSTAASD PLPSALMPPT NSVPPISLPN PASHLDSPMN PLFYSLPTAS SSSGLAFSGL 180 RAPSVPHGIS IPCTGFDLPQ PQLNSLGLGF PSSQSQSQRD DEFHLSQLQT SASVMNDHPL 240 FGSTAASLLL SSLRQPKKLE DYQALMPYEE LHAASAEAIG NLGVIKEVKL EGDSNAIDHN 300 RIEWPIPLEN SFDAIIPAAS TSLAGDSSFL YWNSAIGAWP DSAHCESSVA PLI

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence Send to blast

MGEMLLIPGN NNSENNNTDT NNNKNASTAT SNSSTSTNSN MIHAAAAPSA ARVMDKPAQD  60
HQAALKCPRC DSSNTKFCYY NNYSLSQPRH FCKACKRYWT RGGTLRNVPV GGGCRKNKRV  120
KKPTSTAASD PLPSALMPPT NSVPPISLPN PASHLDSPMN PLFYSLPTAS SSSGLAFSGL  180
RAPSVPHGIS IPCTGFDLPQ PQLNSLGLGF PSSQSQSQRD DEFHLSQLQT SASVMNDHPL  240
FGSTAASLLL SSLRQPKKLE DYQALMPYEE LHAASAEAIG NLGVIKEVKL EGDSNAIDHN  300
RIEWPIPLEN SFDAIIPAAS TSLAGDSSFL YWNSAIGAWP DSAHCESSVA PLI

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010929446.1	0.0	dof zinc finger protein DOF1.4 isoform X1
Refseq	XP_029123042.1	0.0	dof zinc finger protein DOF1.4 isoform X1
TrEMBL	A0A2H3X7M2	0.0	A0A2H3X7M2_PHODC; dof zinc finger protein DOF1.4-like
STRING	XP_008779534.1	0.0	(Phoenix dactylifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28310.1	1e-36	Dof family protein